Sequences from confirmation amplicon


Confirmation sequences for line 217E02 and hit At5g03840 are shown.
Line ID 217E02
Locus At5g03840 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:1025907
Primers used for PCR MM15 - 8474, show primer details
   
Sequence Name 38-K019545-022-217-E02C-MM15
GenBank Accession LN502825 [GenBank]
Sequencing primer gene specific primer, MM15: 5'-TTAAAAATAGCTTTTTATTCGCCG-3'
Sequence (A. th genome BLAST matches underlined)
>38-K019545-022-217-E02C-MM15
TTCCAAATGGGACGAAATTTAGACGTTAGTGGGTTTTGTTCTTCGTGACACAAAAGATAT
TCTATATATTAACGAAATCTAGCGATCGATATGGTATTTATATAAAGTCTTGGTCATAGA
TAGGGGTTGAAACTTGAAACCATGCATGATATGCCAATGTTGCTGAAGCAGTCAATGTTG
CTGAAGAAGTCAAACGTAATTATATAGTGAATACCAAAAAAGTGATATTTCTTAATTCAA
TTAAATATAATTATAGTTTTAAATCACCTAAAATAAGTTACTTATTAAAACCCCCCAAAT
TTACTTTAATATAGTTGGTGTACATGTTTGAGAAAGCAAACAAAAAGAAAAAGAAAAAGA
AAAAAAAAAGAGAAAGAGGTTAGTACCCATAATTGGGAATTAATGCCTATTGATTCTTTT
ATTGCCTATTGAAAATGGCTTCATGTCCGGGAAATCTACATGGATCACCAATGAGTATGA
TGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAA
ATGTCCGCAGCGTTATTATAAAATGAAAGTACTTTTTGATAAAACGACAAATT
   
Sequence Name 39-K019545-022-217-E02C-8409
GenBank Accession LN503194 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>39-K019545-022-217-E02C-8409
AATTTCCCTGCCATGAAGCCATTTACAATAGACAATAAAAGAATCAATAGACATTAATTC
CCAATTATGTGTACTAACCTCTTTCTCTTTTTTTTTTCTTTTTCTTTTTCTTTTTGTTTG
CTTTCTCAAACATGTACACCAACTATATTAAAGTAAATTTGGGGGGTTTTAATAAGTAAC
TTATTTTAGGGGATTTAAAACTATAATTATATTTAATTGAATTAAAAAATATCACTTTTT
TGGTATTCACTATATAATTACGTTTGACTTCTTCAGCAACATTGACTGCTTCAGCAACAT
TGGCATATCATGCATGGTTTCAAGTTTCAACCCCTATCTATGACCAAAACTTTATATAAA
TACCATATCGATCGCTAAATTTCGTTAATATATAAAATATCTTTTGTGTCACGAAAAACA
AAACCCACTAACGTCTAAATTTCAACAAAATTCCTAGCTATATATACCTCGGCGAATAAA
AAGCTATTTTTA

Last Updated on 06.12.2018 16:11