Sequences from confirmation amplicon


Confirmation sequences for line 220B01 and hit At2g40950 are shown.
Line ID 220B01
Locus At2g40950 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:17089107
Primers used for PCR NE40 - 8474, show primer details
   
Sequence Name 58-K102433-0022-220-B01C-8409
GenBank Accession LN509666 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>58-K102433-0022-220-B01C-8409
GCCTTTACATTGAATATATAATTAGATCTATAGTTCCCATAAAAAGCACCACTAATTCCT
CCATAATTAACGTTCACAATTGGAGCTAATGCACCAAACAAAAATAGACAAAACAGAAGA
CCCAGAAAACTAATACTAGCCACCTTCTTGGTCTTAGCTTCACTCTTCTTACTCTCGGAC
TTCTTAGCCTTGGATGTTCCAAGGGTGTTCTGTGGTTTCAACCTAGGAATAGGAATCAAA
GGCACTTGAGATCCTTGTTGCTTCACCATATAAGGAGGACAAGGCATCCATGGATAAGGC
ATTGGAGCCATAGGTGGATACATTCCCATCGGAGGTGGTGGAAGATGCGGCGGGCACATT
CCATTGCCACCCAATTGCTGCCTTAGAGTAGCATTCTCAGCCATGAAATACGATATCTTA
CCGTTCAAATCCGTAATCGTAGAATGCATATTCCTAACCTTTTCTTCAAGCTCCTCGACG
TAATGCTTCTTCCTCTGCCTAGAAAGCTGAGCACTTTCACGG
   
Sequence Name 58-K102434-0022-220-B01C-NE40
GenBank Accession LN509667 [GenBank]
Sequencing primer gene specific primer, NE40: 5'-AGACTCATGAGAAACCGTGAAAGT-3'
Sequence (A. th genome BLAST matches underlined)
>58-K102434-0022-220-B01C-NE40
CATTACGTCGAGGAGCTTGAAGAAAGGTTAGGAATATGCATTCTACGATTACGGATTTGA
ACGGTAAGATATCGTATTTCATGGCTGAGAATGCTACTCTAAGGCAGCAATTGGGTGGCA
ATGGAATGTGCCCGCCGCATCTTCCACCACCTCCGATGGGAATGTATCCACCTATGGCTC
CAATGCCTTATCCATGGATGCCTTGTCCTCCTTATATGGTGAAGCAACAAGGATCTCAAG
TGCCTTTGATTCCTATTCCTAGGTTGAAACCACAGAACACCCTTGGAACATCCAAGGCTA
AGAAGTCCGAGAGTAAGAAGAGTGAAGCTAAGACCAAGAAGGTGGCTAGTATTAGTTTTC
TGGGTCTTCTGTTTTGTCTATTTTTGTTTGGTGCATTAGCTCCAATTGTGAACGTTAATT
ATGGAGGAATTAGTGGTGCTTTTTATGGGAACTATAGATCTAATTATATATTCAATTGTA
AATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGA
GAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGT
TATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAG
GCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTC
A

Last Updated on 06.12.2018 16:11