Sequences from confirmation amplicon


Confirmation sequences for line 223C10 and hit At5g11060 are shown.
Line ID 223C10
Locus At5g11060 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:3511330
Primers used for PCR DL10 - 8474, show primer details
   
Sequence Name 09-K017254-022-223-C10C-DL10
GenBank Accession LN489962 [GenBank]
Sequencing primer gene specific primer, DL10: 5'-AGCTTGACCACTTCATGGTAACTT-3'
Sequence (A. th genome BLAST matches underlined)
>09-K017254-022-223-C10C-DL10
ACTCTCAATTCCCATTATTCTATTCCTTTTCTTTTCTTTTGGAAAATAAAATCACTAAAA
ATTACTTTCATCTTTTATATTTAAAACGGTTTGACAAATTTGAATATTTTGTTGTTAATT
ATCTCCAAATTTATAAAAGTAAATTAGAGAAGAAAATCAAAAATTCTTTCTAGACTTGTA
CTTTGCACCGACAGACATGATCAGTGGGTTGGATAAATCGTCAGTTAAAAATTTGGATAT
TAGTTTTGCACAGTAGTAATTTGACAGCATAAGGTTTATTTTGAGATAGATTTTTGCTGA
GTGTAAGTGATTGAGCAATTTCTGGAGAAATCTACATGGATCAGCAATGAGTATGATGGT
CAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGT
CCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCG
TATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTG
TCTACATTCACGTCCAAAT
   
Sequence Name 10-K017254-022-223-C10C-8409
GenBank Accession LN490428 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>10-K017254-022-223-C10C-8409
TAGATTTCTCCAGAAATTGCTCAATCACTTACACTCAGCAAAAATCTATCTCAAAATAAA
CCTTATGCTGTCAAATTACTACTGTGCAAAACTAATATCCAAATTTTTAACTGACGATTT
ATCCAACCCACTGATCATGTCTGTCGGTGCAAAGTACAAGTCTAGAAAGAATTTTTGATT
TTCTTCTCTAATTTACTTTTATAAATTTGGAGATAATTAACAACAAAATATTCAAATTTG
TCAAACCGTTTTAAATATAAAAGATGAAAGTAATTTTTAGTGATTTTATTTTCCAAAAGA
AAAGAAAAGGAATAAAATAATGGGAATTGAGAGTGGTAAGAAGGAAAGAGAAGTTAAGTT
ACCATGAAGTGGTCAAGC

Last Updated on 06.12.2018 16:11