Sequences from confirmation amplicon


Confirmation sequences for line 225G05 and hit At4g31420 are shown.
Line ID 225G05
Locus At4g31420 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:15247480
Primers used for PCR 07br - 8474, show primer details
   
Sequence Name 02-K107640-0022-225-G05C-07br
GenBank Accession LN487061 [GenBank]
Sequencing primer gene specific primer, 07br: 5'-TTACAAAAAGGCTAAAAGAATGGG-3'
Sequence (A. th genome BLAST matches underlined)
>02-K107640-0022-225-G05C-07br
ACGGGTCAGTTCCAACCCGATCGGATCTAAAATGGGCGGGGCGCCTTCCTTTTCATTTTG
ATGGCAATCAATCATCATCAATCGACGCTTTTTTAGAGACAAACACGATCGCCGATCCAT
TTACGAGCCGTCGTTGCTCTACACATATCAACAACAAATCTTATCCTCCCAACTATCTTT
TCTCTGATTTTCTTTTCTTCTCCAGTTTCCATTTCTAGAATCGATCGATATTGAAGGAGA
GAAGATGCCTGGTTTAACATGTAACGCGTGTAACATGGAGTTCAAGGACGAAGAAGAACG
TAACCTTCATTACAAATCCGATTGGCACCGCTACAATCTCAAGCGCAAGGTTTCATTTCT
TCTGCTTTCTCTATCGAATTTGAACTCAAGCCTATCTGTTTCTCGGGAAAATCTTGCGTC
GGTGATGAGATGAAAGTTTCTGAGAAACAGCTTTTCCATTTTGCTATCGAAATTGTTTAG
TTAAGGTTATGGAATCGTAGAGTTTATATGAAAATTTGTTTTGAAGCTTATTCTACTAAG
GAACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCA
ATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTA
   
Sequence Name 18-K107641-0022-225-G05C-8409
GenBank Accession LN494334 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>18-K107641-0022-225-G05C-8409
ATAGCTTCAAACAATTTTCATATAAACTCTACGATTCCATAACCTTAACTAAACAATTTC
GATAGCAAAATGGAAAAGCTGTTTCTCAGAAACTTTCATCTCATCACCGACGCAAGATTT
TCCCGAGAAACAGATAGGCTTGAGTTCAAATTCGATAGAGAAAGCAGAAGAAATGAAACC
TTGCGCTTGAGATTGTAGCGGTGCCAATCGGATTTGTAATGAAGGTTACGTTCTTCTTCG
TCCTTGAACTCCATGTTACACGCGTTACATGTTAAACCAGGCATCTTCTCTCCTTCAATA
TCGATCGATTCTAGAAATGGAAACTGGAGAAGAAAAGAAAATCAGAGAAAAGATAGTTGG
GAGGATAAGATTTGTTGTTGATATGTGTAGAGCAACGACGGCTCGTAAATGGATCGGCGA
TCGTGTTTGTCTCTAAAAAAGCGTCGATTGATGATGATTGATTGCCATCAAAATGAAAAG
GAAGGCGCCCCGCCCATTTTAGATCCGATCGGGTTGGAACTGACCCGTTCCTGACCCGAT
ACAAGAGTAGCCCATTTGGCCCATTCTTTTAGCCTTTTTGTA

Last Updated on 06.12.2018 16:11