Sequences from confirmation amplicon


Confirmation sequences for line 240B10 and hit At5g11200 are shown.
Line ID 240B10
Locus At5g11200 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:3567158
Primers used for PCR PP10 - 8474, show primer details
   
Sequence Name 31-K103105-0022-240-B10C-PP10
GenBank Accession LN500119 [GenBank]
Sequencing primer gene specific primer, PP10: 5'-TATACGCATCAACCCACAGAGATA-3'
Sequence (A. th genome BLAST matches underlined)
>31-K103105-0022-240-B10C-PP10
AAATTACAAAATATTTAGACAATGATTCATAAACATATCATAAATAAGATCAATATTAAT
AAAATAAATAGTTTTTTTTACGGGACGGATTGGCGGGACGAGTTTAGCAGGACGTAACTT
AATAACAATTGTAAACTATAAAATAAAAATATTTTATAGATAGATACAATTTGCAAACTT
TTATATATACTAACTTAAAAAAAAAATATTGTCCCTGCGGTATAAGACGGGTTAAAAATC
TAGTTGTTATTATTAAAGGAAATAAAATATCCTCATAAAACAATTTGTTGTAATCTATCT
TTGGGCTAATGTTCTTATCCTACAAGACGAACCCTGACCGTATTCGTCGTAAAAAAAAAA
TTGCTTCGATCCCATCATTGAGTTCAATAATCGGCGCACAAAGGCCGATTCATAAAAACT
CTAGGCCCATTAAAGTAAAGCCCATTCTCAACCCTATCCAGTCTCCCTGTATATATATAT
TACGATATCATTTACTATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATC
AGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCA
ATTCAAAAATGTAGATGTCCG
   
Sequence Name 31-K103106-0022-240-B10C-8409
GenBank Accession LN500120 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>31-K103106-0022-240-B10C-8409
CGGAATGAGCCATTTACAATTGAATAGTAAATGATATCGTAATATATATATACAGGGAGA
CTGGATAGGGTTGAGAATGGGCTTTACTTTAATGGGCCTAGAGTTTTTATGAATCGGCCT
TTGTGCGCCGATTATTGAACTCAATGATGGGATCGAAGCAATTTTTTTTCTACGACGAAT
ACGGTCAGGGTTCGTCTTGTAGGATAAGAACATTAGCCCAAAGATAGATTACAACAAATT
GTTTTATGAGGATATTTTATTTCCTTTAATAATAACAACTAGATTTTTAACCCGTCTTAT
ACCGCAGGGACAATATTTTTTTTTTAAGTTAGTATATATAAAAGTTTGCAAATTGTATCT
ATCTATAAAATATTTTTATTTTATAGTTTACAATTGTTATTAAGTTACGTCCTGCTAAAC
TCGTCCCGCCAATCCGTCCCGTAAAAAAAACTATTTATTTTATTAATATTGATCTTATTT
ATGATATGTTTATGAATCATTGTCTAAATATTTTGTAATTTTGTAATAATTAATTGCTAT
CAAATATCTCTGTGGGTTGATGCGT

Last Updated on 06.12.2018 16:11