Sequences from confirmation amplicon


Confirmation sequences for line 250A11 and hit At1g35515 are shown.
Line ID 250A11
Locus At1g35515 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:13078591
Primers used for PCR DR04 - 8474, show primer details
   
Sequence Name 57-K019240-022-250-A11C-8409
GenBank Accession LN509274 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>57-K019240-022-250-A11C-8409
TAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGCCAAATGTACAAGCAG
ATCCAGTATTGAGAAGATAGCATTCTATGCGTTTTGAATGGAAAAGAAGGTTTTGTAGGC
TTCTCTCTCTCTTCTCTCATTTGCATCTTTTAGAGAGAGAAAGCATCTGATCTTCTTTTT
CCGGCAACAATAGCTTCTTTAGTGTTTGTTGGCCAGTTCTCTGTCCAGAATCTTATGGCT
TTTCCAGCATGGATGTCTGGCTTTTGTCCGGCGATGTTTAGGGCAACGTTTGATTGTCGT
GGTTCTTCTGACACTGTTCGGTTCTTTACGACGATGGTCGGTTTGCGTTTGGCTTCCATT
GGCTTCTTTAGCGGCGGTAGGCTAGCTAAGGTCTAGAGTTTCACCGCCTAT
   
Sequence Name 58-K019240-022-250-A11C-DR04
GenBank Accession LN509575 [GenBank]
Sequencing primer gene specific primer, DR04: 5'-CAGATCTAACAATGAAACGCAAAA-3'
Sequence (A. th genome BLAST matches underlined)
>58-K019240-022-250-A11C-DR04
TCAATCAAACTGAATATAAAGAAATCGAGAGAAGAAAACATAAATCTAAACCGGAATCAA
TCCGGCCAAAAGGTAGACGAAACACCGAAGATAGGCGGTGAAACTCTAGACCTTAGCTAG
CCTACCGCCGCTAAAGAAGCCAATGGAAGCCAAACGCAAACCGACCATCGTCGTAAAGAA
CCGAACAGTGTCAGAAGAACCACGACAATCAAACGTTGCCCTAAACATCGCCGGACAAAA
GCCAGACATCCATGCTGGAAAAGCCATAAGATTCTGGACAGAGAACTGGCCAACAAACAC
TAAAGAAGCTATTGTTGCCGGAAAAAGAAGATCAGATGCTTTCTCTCTCTAAAAGATGCA
AATGAGAGAAGAGAGAGAGAAGCCTACAAAACCTTCTTTTCCATTCAAAACGCATAGAAT
GCTATCTTCTCAATACTGGATCTGCTTGTACATTTGGCAGGATATATTCAATTGTAAATG
GCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGCAAATATGGAGAAA
AAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATT
ATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGA

Last Updated on 06.12.2018 16:11