Sequences from confirmation amplicon


Confirmation sequences for line 253B12 and hit At4g02050 are shown.
Line ID 253B12
Locus At4g02050 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:898972
Primers used for PCR GG03 - 8474, show primer details
   
Sequence Name 10-K100850-0022-253-B12C-8409
GenBank Accession LN490573 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>10-K100850-0022-253-B12C-8409
ATTTACATTGAATATATCCTCCAACCCCATTGTCTGGAACAGAACAGGTGCGTAGAAGAG
AATGGAGTTTATCCCTGTGAGTATCTGAAACATTGGCATGCAAATAGCCATAACTAGCTG
AGGCCTGTGTCGTTTCTGCAAGATGTTTCTGAATGGATGTTTGATGGAATTCGCAAGCTC
ACTCGCATCTACCATGTCTTGAAGCTCGGCGTTGACGTTTTCTGTTCCTCTTAGCTTCAC
TAAGACTCGTCGACCTCTCTCTGTTAATCCTCTTTCGACCAAACTGTTTGGTGTCTCGGG
TAAGAAATACCCGCCAAGCGTCATAAGCAGAGCTGGAAAAGCAGCTAAACCAAGAGAGA
   
Sequence Name 10-K100856-0022-253-B12C-GG03
GenBank Accession LN490574 [GenBank]
Sequencing primer gene specific primer, GG03: 5'-TCTCTCTTGGTTTAGCTGCTTTTC-3'
Sequence (A. th genome BLAST matches underlined)
>10-K100856-0022-253-B12C-GG03
TGGCGGGATTTCTTACCGAGACCCAAACAGTTTGGTCGAAAGAGGATTAACAGAGAGAGG
TCGACGAGTCTTAGTGAAGCTAAGAGGAACAGAAAACGTCAACGCCGAGCTTCAAGACAT
GGTAGATGCGAGTGAGCTTGCGAATTCCATCAAACATCCATTCAGAAACATCTTGCAGAA
ACGACACAGGCCTCAGCTAGTTATGGCTATTTGCATGCCAATGTTTCAGATACTCACAGG
GATAAACTCCATTCTCTTCTACGCACCTGTTCTGTTCCAGACAATGGGGTTTGGAGGATA
TATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGAT
GGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGA
TGTCCGCACGGTTATT

Last Updated on 06.12.2018 16:11