Sequences from confirmation amplicon


Confirmation sequences for line 258C03 and hit At2g43520 are shown.
Line ID 258C03
Locus At2g43520 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:18068350
Primers used for PCR KS11 - 8474, show primer details
   
Sequence Name 25-K023623-022-258-C03C-8409
GenBank Accession LN497268 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>25-K023623-022-258-C03C-8409
GTAGATTTCCCGGACATGAATCATGATTTATTTTACCACCGTGCTATTATATCAGGGATA
TAAAGAGGCAAGTGGTTACTTTTCTTATCAATACTGATCTCAACTCGTGACCCGTGGTTG
TCATGATAATTTCTAGACCCAACGATAAAGATAAAATAGTAGCATCGCACCACAACAAGT
GTTGAGCATGAGTCTATATATATACACATACGTTAACTCCAAAGTGAAACAAAGAGATTA
GAAACTACGGAGAGAAAGAGAGAAGATATATAGCCATGGCAATGAAGTCAGTTTCTACCT
TGGCCGTTTTTGCCATCCTCTTTTTGGTTATCGTTGGTAAATTAACTAACTTCATAGATA
TTTCTCACGTAGTTTTTAAAGTTTGCGTTTGTGTTTGAAGCATCCGGGGACTATTTTTCT
CGGTGATCGCAGTCAAGTTTCATTATGTTTGATTTCTGTTTGCTTAATTCGTTTTATATG
ATAAACACAGAAATGCCAGAGATAAAAGCGCAAGGTAGCAAGTG
   
Sequence Name 26-K023623-022-258-C03C-KS11
GenBank Accession LN497745 [GenBank]
Sequencing primer gene specific primer, KS11: 5'-TTCTTTCAGACACTTGCTACCTTG-3'
Sequence (A. th genome BLAST matches underlined)
>26-K023623-022-258-C03C-KS11
CTTTTATCTCTGGCATTTCTGTGTTTATCATATAAAACGAATTAAGCAAACAGAAATCAA
ACATAATGAAACTTGACTGCGATCACCGAGAAAAATAGTCCCCGGATGCTTCAAACACAA
ACGCAAACTTTAAAAACTACGTGAGAAATATCTATGAAGTTAGTTAATTTACCAACGATA
ACCAAAAAGAGGATGGCAAAAACGGCCAAGGTAGAAACTGACTTCATTGCCATGGCTATA
TATCTTCTCTCTTTCTCTCCGTAGTTTCTAATCTCTTTGTTTCACTTTGGAGTTAACGTA
TGTGTATATATATAGACTCATGCTCAACACTTGTTGTGGTGCGATGCTACTATTTTATCT
TTATCGTTGGGTCTAGAAATTATCATGACAACCACGGGTCACGAGTTGAGATCAGTATTG
ATAAGAAAAGTAACCACTTGCCTCTTTATATCCCTGATATAATAGCACGGTGGTAAAATA
AATCATGATTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATG
GAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGC
GTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGNTATTTA
TAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATNTCGACGTGTCT

Last Updated on 06.12.2018 16:11