Sequences from confirmation amplicon


Confirmation sequences for line 270G01 and hit At1g49780 are shown.
Line ID 270G01
Locus At1g49780 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:18429098
Primers used for PCR KS18 - 8474, show primer details
   
Sequence Name 23-K027639-022-270-G01C-8409
GenBank Accession LN496420 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>23-K027639-022-270-G01C-8409
ATTGAATATATCCTGCAATTGAAGCTTCAAAAGCATCTGAGCTTTTCTCTTCGCTCTCTC
CGTACAATCACTCTGCACCAGAAGCAACAACTGCGTCACCAATCCCGCCGCCGCAGCTTC
ATCTCTACACCGTTCCTCCGCCGTACATAAAGCCAACAACGCTCCCGCCGCGTACTCCGT
CGCTCTATCTGAAACTCTTAATATCGTCTTCACCATTAGCGGCACCGTCAAAGCATGCTC
ACCAAACGCAGCACATCCTTCTGGTAATCGGCAAAGAAGCTCCACTGTCGCTAAACCTCG
CTCCGTATCACACCTATCGAAATCCGCCGCGAGACGGTCGATTAAAATCCCCGGAGCTCC
GGCGGAGATCGCTAGATGTCTCGTTTGTTTCACGAGACAGAGAGCGAAAATCGCTTTGAT
TCCGATCTTCAAAGCTCGCCGCGATGAAATCGGATTCTTGAGAAGATCGAGAACGCCTTC
GAATATCGAATCAGATCCGGAAATGATCAATTTCAGATCCATGGATTTCGCTCCGGTCAA
CACCATCTCAATCAACGCGGCGGCGTTAACCCTAAT
   
Sequence Name 24-K027639-022-270-G01C-KS18
GenBank Accession LN496858 [GenBank]
Sequencing primer gene specific primer, KS18: 5'-TTGATTCTTCGATTGAAATTAGGG-3'
Sequence (A. th genome BLAST matches underlined)
>24-K027639-022-270-G01C-KS18
AGGTGTTGACGGAGCGAATCCATGGATCTGAAATTGATCATTTCCGGATCTGATTCGATA
TTCGAAGGCGTTCTCGATCTTCTCAAGAATCCGATTTCATCGCGGCGAGCTTTGAAGATC
GGAATCAAAGCGATTTTCGCTCTCTGTCTCGTGAAACAAACGAGACATCTAGCGATCTCC
GCCGGAGCTCCGGGGATTTTAATCGACCGTCTCGCGGCGGATTTCGATAGGTGTGATACG
GAGCGAGGTTTAGCGACAGTGGAGCTTCTTTGCCGATTACCAGAAGGATGTGCTGCGTTT
GGTGAGCATGCTTTGACGGTGCCGCTAATGGTGAAGACGATATTAAGAGTTTCAGATAGA
GCGACGGATTACGCGGCGGGAGCGTTGTTGGCTTTATGTACGGCGGAGGAACGGTGTAGA
GATGAAGCTGCGGCGGCGGGATTGGTGACGCAGTTGTTGCTTCTGGTGCAGAGTGATTGT
ACGGAGAGAGCGAAGAGAAAAGCTCAGATGCTTTTGAAGCTTCAATTGCAGGATATATTC
AATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCA
ATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCC
GCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTA
TTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATNTCGACGTGTC
TACNTTCACGTCC

Last Updated on 06.12.2018 16:11