Sequences from confirmation amplicon


Confirmation sequences for line 276F07 and hit At4g01420 are shown.
Line ID 276F07
Locus At4g01420 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:580636
Primers used for PCR JK12 - 8474, show primer details
   
Sequence Name 33-K020436-022-276-F07C-8409
GenBank Accession LN500814 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>33-K020436-022-276-F07C-8409
ATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATTCAATGAATCTACATGA
AAAAGTCATGATTAATTATATTTGACGGTTTTCCTCGACTTGGAGAAATCTATAGGTGAA
AGAGATGATAATAGACGTTCTAGAGGAATCAGAACTTATGCTATCCGAGAGTATCATTGA
TTCTATCGTGTCTAAGGTGTGTATAACGCTTAAGTTTATGAGCTTGATTTAACATTATAG
TGATTTTACTTACTATTTTTGTTTACTTATATTTGGCAAAGACATTTGAAGAGGCCGATT
GGAAAAAAGATGGGATAATAGATTTGGAAGAATGGGAGAATTTTGTTGCCACCTATCCTT
TGACACTAAAGAACATGACTATCCCTTTCTTGAAGTAATTCGTTTGTTTGTTTT
   
Sequence Name 34-K020436-022-276-F07C-JK12
GenBank Accession LN501239 [GenBank]
Sequencing primer gene specific primer, JK12: 5'-ATGGTTAGGAAAAACAAACAAACG-3'
Sequence (A. th genome BLAST matches underlined)
>34-K020436-022-276-F07C-JK12
AATTACTTCAAGAAAGGGATAGTCATGTTCTTTAGTGTCAAAGGATAGGTGGCAACAAAA
TTCTCCCATTCTTCCAAATCTATTATCCCATCTTTTTTCCAATCGGCCTCTTCAAATGTC
TTTGCCAAATATAAGTAAACAAAAATAGTAAGTAAAATCACTATAATGTTAAATCAAGCT
CATAAACTTAAGCGTTATACACACCTTAGACACGATAGAATCAATGATACTCTCGGATAG
CATAAGTTCTGATTCCTCTAGAACGTCTATTATCATCTCTTTCACCTATAGATTTCTCCA
AGTCGAGGAAAACCGTCAAATATAATTAATCATGACTTTTTCATGTAGATTCATTGAATA
TATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGAT
GGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGA
TGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCG
TCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGAC
GTGTCTACATT

Last Updated on 06.12.2018 16:11