Sequences from confirmation amplicon


Confirmation sequences for line 280G10 and hit At4g09020 are shown.
Line ID 280G10
Locus At4g09020 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:5788273
Primers used for PCR SZ05 - 8474, show primer details
   
Sequence Name 03-K021340-022-280-G10C-8409
GenBank Accession LN487294 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>03-K021340-022-280-G10C-8409
ATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGTAGATTTCACACCATGTAC
TCAAGCATGAAAATTTCCTCACCCAAGTAACTAACTTCCTCTTGGTTTCATCTATTCCTT
GGATTTTTGAGTGCTACTCTAATTTTCAATGATTGTCTAAAGGGTGAGATTACATGGCAT
GAAGATAATTGGGACAACAGTGAGAGCAAGTTCCTAGCTTTCACGTAAGACACAAAAGTC
CCAAAGTTTCTTACCTAACTGTGTTATAGTACTCTACAGAGTTATCAGATTTCAGATTAA
TAAGTGACTCTTCTTGCAGTCTCCATGACGGTATAGGTGGCCGTGACATCTATGTGGCAT
TCAACGCCCACGACTACTTTGTCAAGGCTCTGATTCCACAGCCACCACCGGGAAAACAAT
GGTTCCGTGTGGTCAGTCTTTCTTTCTTTTGTCTTCTTTGGTTCTCTAATTCTATGACTG
ATTCAATGTCATGTTTCCGCAGGCTGACACAAACCTCGAGTCGCCGGATGATTTTGTGAG
GGAAGGTGTGGCCGGTGTGGCTGATACCTACAATGTGGCCCCATTCTCTTCAATCCTTCT
   
Sequence Name 04-K021340-022-280-G10C-SZ05
GenBank Accession LN487736 [GenBank]
Sequencing primer gene specific primer, SZ05: 5'-CTTACTTGGACTGGAGAAGGATTG-3'
Sequence (A. th genome BLAST matches underlined)
>04-K021340-022-280-G10C-sz5
AATGGGGCCACATTGTAGGTATCAGCCACACCGGCCACACCTTCCCTCACAAAATCATCC
GGCGACTCGAGGTTTGTGTCAGCCTGCGGAAACATGACATTGAATCAGTCATAGAATTAG
AGAACCAAAGAAGACAAAAGAAAGAAAGACTGACCACACGGAACCATTGTTTTCCCGGTG
GTGGCTGTGGAATCAGAGCCTTGACAAAGTAGTCGTGGGCGTTGAATGCCACATAGATGT
CACGGCCACCTATACCGTCATGGAGACTGCAAGAAGAGTCACTTATTAATCTGAAATCTG
ATAACTCTGTAGAGTACTATAACACAGTTAGGTAAGAAACTTTGGGACTTTTGTGTCTTA
CGTGAAAGCTAGGAACTTGCTCTCACTGTTGTCCCAATTATCTTCATGCCATGTAATCTC
ACCCTTTAGACAATCATTGAAAATTAGAGTAGCACTCAAAAATCCAAGGAATAGATGAAA
CCAAGAGGAAGTTAGTTACTTGGGTGAGGAAATTTTCATGCTTGAGTACATGGTGTGAAA
TCTACAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCA
TGAGTATGATGGTCAATATGGAGA

Last Updated on 06.12.2018 16:11