Sequences from confirmation amplicon


Confirmation sequences for line 284F04 and hit At3g06720 are shown.
Line ID 284F04
Locus At3g06720 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:2120349
Primers used for PCR CK33 - 8474, show primer details
   
Sequence Name 34-K017885-0022-284-F04C-8409
GenBank Accession LN501222 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>34-K017885-0022-284-F04C-8409
ATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAAGTCAACTTGTCCCTCGCTGCCT
CTGCTTCTTAACTCTTTCTTTATCACTTTTCCACTCCCAAATCAATTTTTAGGTTTTTTT
TATAATTATAATTTATTTGCTCTCGGCAGGATCTATATAATACACAGACCAGTCTTTGCG
TGTGCTTGTGTGCATTCATTGATCGGGTTTATATCTTTTCATCGGATTTTCTTTGTCGAG
CAAGAGCCATGTCACTGAGACCCAACGCTAAGACGGAGGTTCGCCGGAACCGATACAAAG
TTGCAGTGGATGCGGAGGAAGGACGACGGAGGAGAGAAGACAACATGGTTGAGATCCGTA
AAAGCAAGCGTGAGGAGAGTTTGATGAAGAAGAGACGTGAAGGTATGCAAGCTCTTCAGG
GTTTCCCTTCAGCTTCCGCCGCCTCCGTCGATAAGAAGGTACAATTCTGGTTTTTAGATG
ATTCGATTGTACTCCTTGTTGTCGGTTTTCTAGGTTTTTGTTTGTGATTTTCATGTCGGC
TTACTGAGGTTTTAGGGTTTCGTTTTTGGGTTCTGGTTAC
   
Sequence Name 33-K017885-0022-284-F04C-CK33
GenBank Accession LN500797 [GenBank]
Sequencing primer gene specific primer, CK33: 5'-TCACAAGACAACTACCGTAACCAG-3'
Sequence (A. th genome BLAST matches underlined)
>33-K017885-0022-284-F04C-CK33
AAAACGAAACCCTAAAACCTCAGTAAGCCGACATGAAAATCACAAACAAAAACCTAGAAA
ACCGACAACAAGGAGTACAATCGAATCATCTAAAAACCAGAATTGTACCTTCTTATCGAC
GGAGGCGGCGGAAGCTGAAGGGAAACCCTGAAGAGCTTGCATACCTTCACGTCTCTTCTT
CATCAAACTCTCCTCACGCTTGCTTTTACGGATCTCAACCATGTTGTCTTCTCTCCTCCG
TCGTCCTTCCTCCGCATCCACTGCAACTTTGTATCGGTTCCGGCGAACCTCCGTCTTAGC
GTTGGGTCTCAGTGACATGGCTCTTGCTCGACAAAGAAAATCCGATGAAAAGATATAAAC
CCGATCAATGAATGCACACAAGCACACGCAAAGACTGGTCTGTGTATTATATAGATCCTG
CCGAGAGCAAATAAATTATAATTATAAAAAAAACCTAAAAATTGATTTGGGAGTGGAAAA
GTGATAAAGAA

Last Updated on 06.12.2018 16:11