Sequences from confirmation amplicon


Confirmation sequences for line 292A11 and hit At4g36710 are shown.
Line ID 292A11
Locus At4g36710 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:17307005
Primers used for PCR KT15 - 8474, show primer details
   
Sequence Name 45-K023833-022-292-A11C-8409
GenBank Accession LN505393 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>45-K023833-022-292-A11C-8409
TAGATTTCCCGGACATGAAGCCATTTACAATTAAATTCGTTTCCATATTGACCGTCGTTT
TGATTTCCCCGGCGATATTTCGTCGTCTAAGTGGAATCACTGATTTTGTTAACAATTTAC
GGAGAGTATCACCTAAGGTCGTTGTATTCGTGGATAGTGAAGGATGGACGGAGATCGCCG
GATCTGGATCATTCCGGCGAGAGTTTGTTAGCGCTCTTGAGTTCTACACGATGGTGCTGG
AGTCGCTCGACGCTGCAGCTCCTCCCGGAGATTTGGTGAAGAAGATAGTGGAAGCGTTCG
TTCTACGACCGAAGATCTCCGCTGCGGTAGAAACGGCGGCTGACAGGAGACACACCGGCG
AAATGACTTGGCGGGAAGCGTTTTGCGCCGCCGGGATGAGGCCGATACAGCTAAGCCAGT
TCGCCGACTTTCAAGCTGAGTGTTTAGGGAAAAA
   
Sequence Name 49-K023833-022-292-A11C-KT15
GenBank Accession LN506702 [GenBank]
Sequencing primer gene specific primer, KT15: 5'-TTTCTCCAATAAACACTCAGCTTG-3'
Sequence (A. th genome BLAST matches underlined)
>49-K023833-022-292-A11C-kt15
TGGCTTAGCTGTATCGGCCTCATCCCGGCGGCGCAAAACGCTTCCCGCCAAGTCATTTCG
CCGGTGTGTCTCCTGTCAGCCGCCGTTTCTACCGCAGCGGAGATCTTCGGTCGTAGAACG
AACGCTTCCACTATCTTCTTCACCAAATCTCCGGGAGGAGCTGCAGCGTCGAGCGACTCC
AGCACCATCGTGTAGAACTCAAGAGCGCTAACAAACTCTCGCCGGAATGATCCAGATCCG
GCGATCTCCGTCCATCCTTCACTATCCACGAATACAACGACCTTAGGTGATACTCTCCGT
AAATTGTTAACAAAATCAGTGATTCCACTTAGACGACGAAATATCGCCGGGGAAATCAAA
ACGACGGTCAATATGGAAACGAATTTAATTGTAAATGGCTTCATGTCCGGGAAATCTACA
TGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTT
TTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGAT
AAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAA
TTCGGAAATCTTTATTTCGACGTGTCTACAT
Primers used for PCR KT14 - 8474, show primer details
   
Sequence Name 55-K023834-022-292-A11C-8409
GenBank Accession LN508682 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>55-K023834-022-292-A11C-8409
ATTCCCGGAACATGAAGCCATTTACAATTGAATATATCCTGCAACAAACCTAATCGCTTT
GAAAGATAACATCTCAAAAGTCTTCATCAGCACAAACTCAATCTGGAAACGAATTTTCAT
CTCCGCCGCGAATTGAGTTAGGTTTTCTTTCACTAGTCGCGTCTCTACGGCGCACTCCTC
CGCCACCACTGCCGTAACTCTTAAAAATCCACCGCTTACAGATTTCTCAGTGATTTCTCT
CATAAGCGATGCGTATTGGCCACCGAATCCAATCTCAAAATCCACCACGTGAACAAACGG
AGAAGACGACTGCGAGCTCAACGAATCGAGTATCGCTTGATTCGCCGTGAAATGAGAGAA
GAGAGGGATCGGAGAAATCCCGGAATATTCCTTAATCGCTCGGATCCTCTGAACAATCTC
GGACCAAGAAGATAACCGGATTGGATTCCGGTTTGATCCGGTTAAAAACGAACCGAGAGC
TTCCTTAA
   
Sequence Name 59-K023834-022-292-A11C-KT14
GenBank Accession LN509874 [GenBank]
Sequencing primer gene specific primer, KT14: 5'-TGCGTTTTACTTTAAGGAAGCTCT-3'
Sequence (A. th genome BLAST matches underlined)
>59-K023834-022-292-A11C-kt14
CCGGAATCAAACCGGAAATCCAATCCGGTTATCTTCTTGGTCCGAGATTGTTCAGAGGAT
CCGAGCGATTAAGGAATATTCCGGGATTTCTCCGATCCCTCTCTTCTCTCATTTCACGGC
GAATCAAGCGATACTCGATTCGTTGAGCTCGCAGTCGTCTTCTCCGTTTGTTCACGTGGT
GGATTTTGAGATTGGATTCGGTGGCCAATACGCATCGCTTATGAGAGAAATCACTGAGAA
ATCTGTAAGCGGTGGATTTTTAAGAGTTACGGCAGTGGTGGCGGAGGAGTGCGCCGTAGA
GACGCGACTAGTGAAAGAAAACCTAACTCAATTCGCGGCGGAGATGAAAATTCGTTTCCA
GATTGAGTTTGTGCTGATGAAGACTTTTGAGATGTTATCTTTCAAAGCGATTAGGTTTGT
TGCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAAT
GAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAA
AAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAAT
TACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTT
TATNTCGACGTGTCTAC

Last Updated on 06.12.2018 16:11