Sequences from confirmation amplicon


Confirmation sequences for line 306H12 and hit At5g65080 are shown.
Line ID 306H12
Locus At5g65080 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:25999975
Primers used for PCR ML07 - 8474, show primer details
   
Sequence Name 16-K030599-022-306-H12C-8409
GenBank Accession LN493315 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>16-K030599-022-306-H12C-8409
GTTATTTAAGCGGAACAACTAACAATTCAATAGAGAAAACCTTGAGTAAGGTTACTAAAA
CCATTGACTCAGTGTAGTAACACAAATTGACCCTATACATATATAGAAGTAGGTTACTTT
CTCTTATTGATATTTGTTTCATAGTTTCAAAATATTTTGGTATACATTATTTCTAATCCC
TATTTGTTTATCTCTTCATCTCTCTCCAGCATGGCCAAGATCATCAGTCGTTTTAAAATA
CAACAAGCTGATGATCCTGAAACCT
   
Sequence Name 55-K030599-022-306-H12C-ML07
GenBank Accession LN508704 [GenBank]
Sequencing primer gene specific primer, ML07: 5'-GAACTTACCAAGGTTTCAGGATCA-3'
Sequence (A. th genome BLAST matches underlined)
>55-K030599-022-306-H12C-ML07
AAACAAATAGGGATTAGAAATAATGTATACCAAAATATTTTGAAACTATGAAACAAATAT
CAATAAGAGAAAGTAACCTACTTCTATATATGTATAGGGTCAATTTGTGTTACTACACTG
AGTCAATGGTTTTAGTAACCTTACTCAAGGTTTCTCTATTGAATTGTTAGTTGTTCCGCT
TAAATAACAACACAAGGTTTGTTAAGCAATAGTAGTTTTTTGTATTTTTCTAACCATATA
TCCATATTATGTGATGGACTTTAGTTTTAATTGTAAATGGCTTCATGTCCGGGAAATCTA
CATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATT
TTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTG
ATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCT
AATTCGGAAATCTTTATTTCGACGTGTCTAC

Last Updated on 06.12.2018 16:11