Sequences from confirmation amplicon


Confirmation sequences for line 319H01 and hit At3g09910 are shown.
Line ID 319H01
Locus At3g09910 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:3037296
Primers used for PCR IM03 - 8474, show primer details
   
Sequence Name 48-K026684-022-319-H01C-8409
GenBank Accession LN506394 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>48-K026684-022-319-H01C-8409
GTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGCACCATTAACCATGA
CTGCATTAAGATGCTCGTTGGCAACAAAGTTGATAGAGTGAGTAGCAGTAGTAGTAACAC
TTGTAGTCAAACAACTTGAGATCGGTTTCACTGATAGTTGTCATTGCAGGAATCAGAAAG
GAAGGTTAGCCGGGAAGAAGGAATGGCTCTAGCGAAAGACCTCAATTGTTTGTTTCATGA
ATGTAGCGCAAGAACCCGAGAAAACGTGAACGGATGCTTCGAAGAGCTAGCTTTGAAGGT
AAGAAAGAATCTTGATGATCCCTTTTCACTTTCAAAACCGGTCGAAACTGAGGAAAATAA
ATAATAGGAGAGTTGCAAAATGAAACAGATAATGGAGGTACCTAGTCTTTT
   
Sequence Name 49-K026684-022-319-H01C-IM03
GenBank Accession LN506707 [GenBank]
Sequencing primer gene specific primer, IM03: 5'-CTTCCAAAAGACTAGGTACCTCCA-3'
Sequence (A. th genome BLAST matches underlined)
>49-K026684-022-319-H01C-im3
CTGTTTCATTTTGCAACTCTCCTATTATTTATTTTCCTCAGTTTCGACCGGTTTTGAAAG
TGAAAAGGGATCATCAAGATTCTTTCTTACCTTCAAAGCTAGCTCTTCGAAGCATCCGTT
CACGTTTTCTCGGGTTCTTGCGCTACATTCATGAAACAAACAATTGAGGTCTTTCGCTAG
AGCCATTCCTTCTTCCCGGCTAACCTTCCTTTCTGATTCCTGCAATGACAACTATCAGTG
AAACCGATCTCAAGTTGTTTGACTACAAGTGTTACTACTACTGCTACTCACTCTATCAAC
TTTGTTGCCAACGAGCATCTTAATGCAGTCATGGTTAATGGTGCAGGATATATTCAATTG
TAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATG
GAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGC
GTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTAT
AGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACAT
TCA

Last Updated on 06.12.2018 16:11