Sequences from confirmation amplicon


Confirmation sequences for line 320D03 and hit At2g40000 are shown.
Line ID 320D03
Locus At2g40000 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:16701100
Primers used for PCR IS61 - 8474, show primer details
   
Sequence Name 11-K023618-022-320-D03C-8409
GenBank Accession LN490931 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>11-K023618-022-320-D03C-8409
GATTCCCGGACATGAAGCCATTTACAATTGAATATATCCGGAAGATTTTTTGAAATTGAA
GAAACAGTTACAGATCAAATCGACGGGTAAAAACGATGCGTTTTGTTTCAGATCTAAAGG
ATTAGTGGAGATGATGAAGATGTCGAAAGATCTGAGACAGAAAGTACCGGCGGTCTTGGC
GGTTGAGGTAGATCCAACCGGAGGACCAAGATTACAAGAGGCGGCGATGAAGCTTTACGC
GAGGAAGACAGAGTGCGATAAGATTCATTTGCTTCAGGGGATGCAAGCGGTGGAAGCGGC
GGCGAAGAGTTTCTTCTTTGGGTATAGGCAGTTAGTGGCGGCTATGATGGGAAGTGCGGA
GATGAACGCGACGGCGAGTCAAGAGTCGTGTGACTCACTGAGTCAGATATTTATGGAGCC
GACGTATTTCCCGAGCCTTGACGCGGCAAAGACGTTTCTGGGAGAGTTTTGGAGTCATTT
GGGATGATTAAATTTTAATTTCTGCTGGTATAATTATTTAATATAAATTTAAATTGGTGG
TTTGGTTTAATTTAGTTTGTAAGATAGTGAAATTTTTGGAACATTTGACGA
   
Sequence Name 12-K023618-022-320-D03C-IS61
GenBank Accession LN491391 [GenBank]
Sequencing primer gene specific primer, IS61: 5'-TCAAATATGGATCGTCAAATGTTC-3'
Sequence (A. th genome BLAST matches underlined)
>12-K023618-022-320-D03C-IS61
AAATTTCACTATCTTACAAACTAAATTAAACCAAACCACCAATTTAAATTTATATTAAAT
AATTATACCAGCAGAAATTAAAATTTAATCATCCCAAATGACTCCAAAACTCTCCCAGAA
ACGTCTTTGCCGCGTCAAGGCTCGGGAAATACGTCGGCTCCATAAATATCTGACTCAGTG
AGTCACACGACTCTTGACTCGCCGTCGCGTTCATCTCCGCACTTCCCATCATAGCCGCCA
CTAACTGCCTATACCCAAAGAAGAAACTCTTCGCCGCCGCTTCCACCGCTTGCATCCCCT
GAAGCAAATGAATCTTATCGCACTCTGTCTTCCTCGCGTAAAGCTTCATCGCCGCCTCTT
GTAATCTTGGTCCTCCGGTTGGATCTACCTCAACCGCCAAGACCGCCGGTACTTTCTGTC
TCAGATCTTTCGACATCTTCATCATCTCCACTAATCCTTTAGATCTGAAACAAAACGCAT
CGTTTTTACCCGTCGATTTGATCTGTAACTGTTTCTTCAATTTCAAAAAATCTTCCGGAT
ATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGA
TGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAG
ATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCC
GTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGA

Last Updated on 06.12.2018 16:11