Sequences from confirmation amplicon


Confirmation sequences for line 332F09 and hit At2g28780 are shown.
Line ID 332F09
Locus At2g28780 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:12342067
Primers used for PCR AC55 - 8474, show primer details
   
Sequence Name 09-K104226-0022-332-F09C-AC55
GenBank Accession LN490156 [GenBank]
Sequencing primer gene specific primer, AC55: 5'-TTTGCATGTGAAAACAAAAGTAGC-3'
Sequence (A. th genome BLAST matches underlined)
>09-K104226-0022-332-F09C-AC55
ATTCCGATTAGATATGTTACTCATTTGAGATGGTTTTTCCATTAAAAGAGGAATGATTAG
GTTGGTTAAAAATTTAAAGATTTTCGAGACATAGTACATATATATTTTTTTTTTGATAAA
CCATTGTACATATATATACGTGTTAAAAATAGATTTGAGGAACAAACATGTTGGTGGACT
TGGTAATACAGTCACAAAACACGTTGACGTGGGTATTAAAGTGTGTTGCTAACTTTATTC
CGTACCACATTATTACATATAAAATCCTACTTATGTCAGCAACCACCGAAAATTTTGTCT
TAATTCTTCCCAATATTGCGAACAAACTGTGTCGCATCACAGACAAAATATGATTCCCTT
TTGATTAATTAACATAATCCCTATAAAATTATATACTTCTTCTTTGACAGTATTAAATCA
ACCTATTAGCAATGGCATGGGATTCTATGATAATATTAAGAAAAATAAAATAGAAAACTA
ATAATTTATTTTTAAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAAT
GAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAA
AAATGTAGATGTC
   
Sequence Name 25-K104227-0022-332-F09C-8409
GenBank Accession LN497421 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>25-K104227-0022-332-F09C-8409
TTCGGACTGAGCCATTTACATTTAAAAATAAATTATTAGTTTTCTATTTTATTTTTCTTA
ATATTATCATAGAATCCCATGCCATTGCTAATAGGTTGATTTAATACTGTCAAAGAAGAA
GTATATAATCTTATAGGGATTATGTTAATTAATCAAAAGGGAATCATATTTTGTCTGTGA
TGCGACACAGTTTGTTCGCAATATTGGGAAGAATTAAGACAAAATTTTCGGTGGTTGCTG
ACATAAGTAGGATTTTATATGTAATAATGTGGTACGGAATAAAGTTAGCAACACACTTTA
ATACCCACGTCAACGTGTTTTGTGACTGTATTACCAAGTCCACCAACATGTTTGTTCCTC
AAATCTATTTCTAACACGTATATATATGTACAATGGTTTATCAAAAAAAAAATATATATG
TACTATGTCTCGAAAATCTTTAAATTTTTAACCAACCTAATCATTCCTCTTTTAATGGAA
AAACCATCTCAAATGATGTAACATTATTCTAAATCGTGAAAATTCTAAATATAGCTACTT
TTGTTTTCACATGCA

Last Updated on 06.12.2018 16:11