Sequences from confirmation amplicon


Confirmation sequences for line 345E06 and hit At3g53640 are shown.
Line ID 345E06
Locus At3g53640 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:19889007
Primers used for PCR GD60 - 8474, show primer details
   
Sequence Name 13-K033879-022-345-E06C-8409
GenBank Accession LN491935 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>13-K033879-022-345-E06C-8409
TGAAGCCATTTACAATTGGTGCCGGACAGAGAGAGCGCGGGAGAAAATCGAACCCTAACC
CTAATTTTGCGATTGTCTATCTTTTCCGACGATCTGATGGTGAGCGATAAGATAGTAGAA
TCAAGCCACCGCAAACACCGTAGGTCGTATTCTCCTTCCGACGAAGTCGTTAAATCTTCC
AAGCGGCACAAGCACCATCATCACAAGCATCGACACAGTCATCATCTTGATGAGGACGGC
AATGAAAAGAATGTTTATCCATTTTTGGGGAATCCTGGTAACGATGGTGAACTTGATTTG
GAGGAAGGGGAGAATTTGAAGAAGAAGGGAAGCATTGATAGAGAAAGCAATAGAGACAAC
TACAGAGGTAGGAGTAGTAGAGATAAAGCTAGGTCTAGTAGTAGAGAGACTGGGAGGGAG
AATGAAAGAGAGAGACGTAAGGATCAAGATAGGGATAGAGGAAGAAGAGAAGACCAGATG
AATCAGGAGAACGTTTGTCACTGCA
   
Sequence Name 69-K033879-0022-345-E06C-GD60
GenBank Accession LN512136 [GenBank]
Sequencing primer gene specific primer, GD60: 5'-CTCCTGATCACTCTGGTCTTCTCT-3'
Sequence (A. th genome BLAST matches underlined)
>69-K033879-0022-345-E06C-GD60
CTTACGTCTCTCTCTTTCATTCTCCCTCCCAGTCTCTCTACTACTAGACCTAGCTTTATC
TCTACTACTCCTACCTCTGTAGTTGTCTCTATTGCTTTCTCTATCAATGCTTCCCTTCTT
CTTCAAATTCTCCCCTTCCTCCAAATCAAGTTCACCATCGTTACCAGGATTCCCCAAAAA
TGGATAAACATTCTTTTCATTGCCGTCCTCATCAAGATGATGACTGTGTCGATGCTTGTG
ATGATGGTGCTTGTGCCGCTTGGAAGATTTAACGACTTCGTCGGAAGGAGAATACGACCT
ACGGTGTTTGCGGTGGCTTGATTCTACTATCTTATCGCTCACCATCAGATCGTCGGAAAA
GATAGACAATCGCAAAATTAGGGTTAGGGTTCGATTTTCTCCCGCGCTCTCTCTGTCCGG
CACAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGG
TCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATG
TCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTC
GTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGT
GTCTACATTCAC

Last Updated on 06.12.2018 16:11