Sequences from confirmation amplicon


Confirmation sequences for line 355A07 and hit At1g12600 are shown.
Line ID 355A07
Locus At1g12600 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:4287846
Primers used for PCR MP49 - 8474, show primer details
   
Sequence Name 03-K025266-022-355-A07C-8409
GenBank Accession LN487325 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>03-K025266-022-355-A07C-8409
CAACGCTGCCTCAGGTGATAATTAACTGACAGCAATGTTATATGAAGGTCATCAAATGAA
TATTTACAATTAATCTCTGAGATCAATTTCGTTCAATATATGATAGATCACTGCATTTGT
TTATCTCGGCTTTGTAATCTAAGACTCCTTACCTTATTACATTGTCAGTAACGGTTTGAA
CTCACATGGATTTTGTATCAATAAATGTTACGGTAGGAATTTAAAAAGTCACATTCTTGT
TTAATCCCGGGGGTATTGGTTAGCAAGATATGTTACATTTTCTTAATTGGTGAATCATTG
TGTAATTCTCGCAGTATCTCTTAACATTGATTTCTTCCTCTGTTATCTAGGTTTTGCCGG
TTATGGTTATGGGAGCTTTTATACCAGGGTTGAGAAGAAAATACCCTG
   
Sequence Name 04-K025266-022-355-A07C-MP49
GenBank Accession LN487764 [GenBank]
Sequencing primer gene specific primer, MP49: 5'-ACAGGGTATTTTCTTCTCAACCCT-3'
Sequence (A. th genome BLAST matches underlined)
>04-K025266-022-355-A07C-MP49
CCATAACCATAACCGGCAAAACCTAGATAACAGAGGAAGAAATCAATGTTAAGAGATACT
GCGAGAATTACACAATGATTCACCAATTAAGAAAATGTAACATATCTTGCTAACCAATAC
CCCTGGGATTAAACAAGAATGTGACTTTTTAAATTCCTACCGTAACATTTATTGATACAA
AATCCATGTGAGTTCAAACCGTTACTGACAATGTAATAATGTAAGGAGTCTTTGATTACA
AAGCCGAGATAAACAAATGCAATGATCTATATATATTGAACGAAATTGATCTCAGAGATT
AATTGTAAATATTCAATTGATGACCATCATACTCATTGCTGTCAGGATATATTCAATTGT
AAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGG
AGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCG
TTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATA
GGCGAAAGCAATAAACAAATTATCTA

Last Updated on 06.12.2018 16:11