Sequences from confirmation amplicon


Confirmation sequences for line 360A04 and hit At4g01720 are shown.
Line ID 360A04
Locus At4g01720 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:747320
Primers used for PCR IS50 - 8474, show primer details
   
Sequence Name 51-K022411-022-360-A04C-8409
GenBank Accession LN507368 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>51-K022411-022-360-A04C-8409
AGATTTCCCGCACATGAAGCCATTTACAATTGAATATATCCTCATAATGGTAATTAACGT
ATCCAGGAGAAGTATTGATTTAGAGCACTACCATAAAACCTTATTAACCTCCTTCATACA
ACAGATTTAGAAAGTTTTAAGAAGAGTATAGAAAATAATTCTAAATTTAGAAAGGCTTTA
CTAAATCCCTTTCTAACAAAATCTTTTACTTATGAAAAACCAAAACTAGAATGCGACATA
TTTATTCTTAAAGAA
   
Sequence Name 52-K022411-022-360-A04C-IS50
GenBank Accession LN507685 [GenBank]
Sequencing primer gene specific primer, IS50: 5'-GGAGGTGTATGGGAAGTTATGGTA-3'
Sequence (A. th genome BLAST matches underlined)
>52-K022411-022-360-A04C-IS50
AGTGTTTGGTGGAGGTTGCTGGAGGAGGAGCCTGATAAGAGCATGGCTGCTGCGGCGGAG
GTGGTTGCAGCCATGGCTGTGGCTGACGGGGGAAGAGGATGGTTATGGTTTCCTTCGTAC
GTTGTTGTCAAGATAGTTGTATCCTCCGCGCATCGTTGGACCTATTTACATTCAAATAAA
CATTTTAAATCATTTTGTTACGTAAAACAATAAAGTTTTCTTTAAGAATAAATATGTCGC
ATTCTAGTTTTGGTTTTTCATAAGTAAAAGATTTTGTTAGAAAGGGATTTAGTAAAGCCT
TTCTAAATTTAGAATTATTTTCTATACTCTTCTTAAAACTTTCTAAATCTGTTGTATGAA
GGACTTTAATAAGGTTTTATGGTATTGCTCTAAATCAATACTTCTAAAGGATACGTTAAT
TACCATTATGAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGAT
CAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTC
AATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAAC
GACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAA

Last Updated on 06.12.2018 16:11