Sequences from confirmation amplicon


Confirmation sequences for line 360B08 and hit At3g25500 are shown.
Line ID 360B08
Locus At3g25500 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:9255036
Primers used for PCR BF01 - 8474, show primer details
   
Sequence Name 09-K020887-022-360-B08C-8409
GenBank Accession LN489981 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>09-K020887-022-360-B08C-8409
AGATTTCCCCGACATGAAGCCATTTACCACTCTTCTTCCATCACCTCTTTTGGCTTTCTC
TCTACTCTCTCTACTACTCTCTCACCATCACTGAGTTAAGAGAACAAACCAAAAACAAAA
TTATCAAACCATCACCAGCAGAATCTTAGCTGGATTCATCACTCTATTCAAAAAGTTTCT
CTCTTCTCTTTTCTCAGATCTTGAACTCTTGAAGAAGAAAGAAGAAGATAACACAATGCT
CTTCTTCTTATTCTTCTTCTACTTACTCTTATCTTCATCCTCCGATCTAGTCTTCGCCGA
CCGTCGTGTACTCCACGAACCATTCTTCCCTATAGATTCACCACCACCGTCACCACCATC
ACCACCACCACTTCCTAAACTACCATTCTCTTCAACCACTCCTCCATCTTCATCAGACCC
AAATGCTTCTCCTTTCTTCCCTTTATAAGNCNATATGGAGAAAAAGAAAGAGTAATTACC
AATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACAT
TTTGATAAAACGACAAATTTCGATCCGTCGTATTTATTGGCGAAAGCAATAAACAAATTA
TTCTAATTCCGAAATCTTTATTTCGACGTGTCTACATT
   
Sequence Name 10-K020887-022-360-B08C-BF01
GenBank Accession LN490454 [GenBank]
Sequencing primer gene specific primer, BF01: 5'-ATAAAGGGAAGAAAGGAGAAGCAT-3'
Sequence (A. th genome BLAST matches underlined)
>10-K020887-022-360-B08C-BF01
TCTGATGAAGATGGAGGAGTGGTTGAAGAGAATGGTAGTTTAGGAAGTGGTGGTGGTGAT
GGTGGTGACGGTGGTGGTGAATCTATAGGGAAGAATGGTTCGTGGAGTACACGACGGTCG
GCGAAGACTAGATCGGAGGATGAAGATAAGAGTAAGTAGAAGAAGAATAAGAAGAAGAGC
ATTGTGTTATCTTCTTCTTTCTTCTTCAAGAGTTCAAGATCTGAGAAAAGAGAAGAGAGA
AACTTTTTGAATAGAGTGATGAATCCAGCTAAGATTCTGCTGGTGATGGTTTGATAATTT
TGTTTTTGGTTTGTTCTCTTAACTCAGTGATGGTGAGAGAGTAGTAGAGAGAGTAGAGAG
AAAGCCAAAAGAGGTGATGGAAGAAGAGTGGTAAATGGCTTCATGTCCGGGAAATCTACA
TGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTT
TTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGAT
AAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAA
TTCGGAAATCTTTATTTCGACGTGTCTACATTCA

Last Updated on 06.12.2018 16:11