Sequences from confirmation amplicon


Confirmation sequences for line 368B08 and hit At2g34140 are shown.
Line ID 368B08
Locus At2g34140 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:14415019
Primers used for PCR TA27 - 8474, show primer details
   
Sequence Name 19-K030140-022-368-B08C-8409
GenBank Accession LN494635 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>19-K030140-022-368-B08C-8409
ATTGAATATATTACGAATTGCACTTTTCATAACTACTTAGGACATTGCGGATCCAGTAAC
TACTTACGAATTGCACTTTTCAAATAATTAGNCTTTTTAAAGAAAGCTTTGTAGCTTGAT
CCGCATTGGCATTCGTGTTTTACGTGTAGATGTGAATTCAAGACCCAAAAGTAAAGCGAT
GAATGCGCCTATTACTACATGCTTTAAAAAGTTTTTAACAAATAAATATTTTAATCTCCA
CTAATTCAGTCACTTTTCTTCTCCAATTCCTGCTAAAAAGTTATACTATCATCTTTCTAT
AAAAAGACGTCTTCTCTATTTCTTACCCCCAACAAACTTTGGATAAGCTATTTTCCATTC
TCTGCACGTTTTCATGGCGACTCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACTAT
TGCATTTAACACTCGAACAATAAAAAATGAAGAAGAGACACACCCGCCGGAGCAAGAAGC
CACAATAGCCGTTAGATCATCATCATCATCGGATCTGACGGCCGAGAAGCGTCCGGATAA
GATCATAGCATGTCCAAGATGCAAGAGCATGGAGAC
   
Sequence Name 19-K030140-022-368-B08C-TA27
GenBank Accession LN494636 [GenBank]
Sequencing primer gene specific primer, TA27: 5'-ACAGAACTTTGTCTCCATGCTCTT-3'
Sequence (A. th genome BLAST matches underlined)
>19-K030140-022-368-B08C-TA27
CTTATCCGGACGCTTCTCGGCCGTCAGATCCGATGATGATGATGATCTAACGGCTATTGT
GGCTTCTTGCTCCGGCGGGTGTGTCTCTTCTTCATTTTTTATTGTTCGAGTGTTAAATGC
AATAGTTTTGCCAAAGAGTTTAATCCCTTGAGAATCTTGAGTCGCCATGAAAACGTGCAG
AGAATGGAAAATAGCTTATCCAAAGTTTGTTGGGGGTAAGAAATAGAGAAGACGTCTTTT
TATAGAAAGATGATAGTATAACTTTTTAGCAGGAATTGGAGAAGAAAAGTGACTGAATTA
GTGGAGATTAAAATATTTATTTGTTAAAAACTTTTTAAAGCATGTAGTAATAGGCGCATT
CATCGCTTTACTTTTGGGTCTTGAATTCACATCTACACGTAAAACACGAATGCCAATGCG
GATCAAGCTACAAAGCTTTCTTTAAAAAGCTAATTATTTGAAAAGTGCAATTCGTAAGTA
GTTACTGGATCCGCAATGTCCTAAGTAGTTATTGAAAAGTGCAATTCGTAATATATTCAA
TTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAAT
ATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGC
AGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATT
TATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTA
CA

Last Updated on 06.12.2018 16:11