Sequences from confirmation amplicon


Confirmation sequences for line 384G11 and hit At4g38000 are shown.
Line ID 384G11
Locus At4g38000 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:17858757
Primers used for PCR MZ85 - 8474, show primer details
   
Sequence Name 17-K027153-022-384-G11C-8409
GenBank Accession LN493710 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>17-K027153-022-384-G11C-8409
TAGATTTCCCGGACACGAAGCCATTTACAATTTCTCGAACGGGACGTCATCGGCGTCTCG
TGAGCTTGTAAGAAACCATCCATCGACGGCAATGATGATGATGAGTTCTGGTGGATTCTC
CGGCTATATGTTTCCGTTGGATCCTAACTTCAACCTTGCCTCGTCTTCTATCGAGTCTTT
GAGTTCTTTTAACCAAGATTTGCACCAGAAGCTTCAGCAACAAAGACTCGTCACTTCCAT
GTTTCTCCAAGATTCTCTTCCGGTTAACGAGAAAACGGTTATGTTTCAGAACGTAGAGTT
GATTCCTCCTTCGACGGTGACGACGGATTGGGTTTTCGATAGGTTCGCCACTGGAGGAGG
TGCAACAAGTGGCAATCATG
   
Sequence Name 21-K027153-022-384-G11C-MZ85
GenBank Accession LN495518 [GenBank]
Sequencing primer gene specific primer, MZ85: 5'-CATCATTATCTTCATGATTGCCAC-3'
Sequence (A. th genome BLAST matches underlined)
>21-K027153-022-384-G11C-MZ85
CTCCTCCAGTGGCGAACCTATCGAAAACCCAATCCGTCGTCACCGTCGAAGGAGGAATCA
ACTCTACGTTCTGAAACATAACCGTTTTCTCGTTAACCGGAAGAGAATCTTGGAGAAACA
TGGAAGTGACGAGTCTTTGTTGCTGAAGCTTCTGGTGCAAATCTTGGTTAAAAGAACTCA
AAGACTCGATAGAAGACGAGGCAAGGTTGAAGTTAGGATCCAACGGAAACATATAGCCGG
AGAATCCACCAGAACTCATCATCATCATTGCCGTCGATGGATGGTTTCTTACAAGCTCAC
GAGACGCCGATGACGTCCCGTTCGAGAAATTGTAAATGGCTTCGTGTCCGGGAAATCTAC
ATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTT
TTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGA
TAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTA
ATTCGGAAATCTTTATTTCGACGTGTCTACATTC

Last Updated on 06.12.2018 16:11