Sequences from confirmation amplicon


Confirmation sequences for line 389C02 and hit At4g37270 are shown.
Line ID 389C02
Locus At4g37270 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:17544448
Primers used for PCR RM11 - 8474, show primer details
   
Sequence Name 03-K027360-022-389-C02C-8409
GenBank Accession LN487338 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>03-K027360-022-389-C02C-8409
GCCATTTACATGAAGCCATTGGTAATACTCATTACTCTTTCTTTTTCTCCATATTGGACA
TGTAGCTTTCTTGGCGTTGTGATGTTTTGCAGAATTGCACTTTTGAGCATTGGTTTGTAT
ATGTTCTCTTGTAGCAAATTAAGCTTTATAAGCTAAATAATCTTATGTGCATCAAATGTC
AATGGTGAGGAATGAATGGTGCATATGCAACAACATCGTCTTATCTATGAAGACCACCAT
ATTTCAACTAACTATTTGATATCATTTTCCTTTTGTCCAAATCCAGTTGAAAACATGGTT
TATTTTCTTTTTCCTTTTTTTTTGCTATGTAAAGGTAGTATCTTCACGTGTAAGTGTGTA
ACCCCACCGTGTGTAACTATTATAGGGAATATTGCTGAAAGGTGCACAGGTTCTAGATGC
TCTTGCGTCTTGCCATACTAT
   
Sequence Name 04-K027360-022-389-C02C-RM11
GenBank Accession LN487776 [GenBank]
Sequencing primer gene specific primer, RM11: 5'-TGTCAAAAGCAATAGTATGGCAAG-3'
Sequence (A. th genome BLAST matches underlined)
>04-K027360-022-389-C02C-RM11
CTTTCGCATATTCCCTATAATAGTTACACACGGTGGGGTTACACACTTACACGTGAAGAT
ACTACCTTTACATAGCAAAAAAAAAGGAAAAAGAAAATAAACCATGTTTTCAACTGGATT
TGGACAAAAGGAAAATGATATCAAATAGTTAGTTGAAATATGGTGGTCTTCATAGATAAG
ACGATGTTGTTGCATATGCACCATTCATTCCTCACCATTGACATTTGATGCACATAAGAT
TATTTAGCTTATAAAGCTTAATTTGCTACAAGAGAACATATACAAACCAATGCTCAAAAG
TGCAATTCTGCAAAACATCACAACGCCAAGAAAGCTACATGTCCAATATGGAGAAAAAGA
AAGAGTAATGAGTATTACCAATGGCTTCATGTAAATGGCTTCATGTCCGGGAAATCTACA
TGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTT
TTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGAT
AAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAA
TTCGGAAATCTTTATTTCGACGTGTCTACATT

Last Updated on 06.12.2018 16:11