Sequences from confirmation amplicon


Confirmation sequences for line 406H11 and hit At2g30620 are shown.
Line ID 406H11
Locus At2g30620 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:13045241
Primers used for PCR JG78 - 8474, show primer details
   
Sequence Name 52-K034069-0022-406-H11C-8409
GenBank Accession LN507732 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>52-K034069-0022-406-H11C-8409
GAAGCCATTTACAATTGAATATATAACCAATCAGATGTGTTTATCTGACTATATAAACAT
CATTCCCATAGTTCTTCTCCTTCTCCTCATCACAAAATTCTCCGACGCATTACATTTTCT
TCCGATCAATACAGAGAGATCAGTTTCTGAGAGAGAAGAAGATGTCTATAGAGGAAGAAA
ACGTTCCAACGACTGTTGACTCAGGAGCTGCCGATACAACGGTGAAATCTCCGGAGAAGA
AACCGGCGGCGAAAGGTGGTAAATCTAAGAAGACGACGACGGCTAAAGCAACGAAGAAGC
CTGTGAAAGCTGCTGCTCCAACGAAGAAGAAAACAACTTCCTCTCACCCTACCTATGAAG
AGGTCAATATTCGATCTAAACTTTTTTTTTTTGAATTTTTATCAAATTCATAGATTTGGA
ATTTGAATTTTGTTTGAATTCGATGCAAATGATTAAAGATGCGATTGTAACGTTGAAGGA
GAGAACTGGATCTAGTCAATACGCGATTCAAAAATTCATAGAGGAGAAACATAAATCACT
GCCTCCTACTTTTAGGAAGCTTTTGCTTGTGAATCTCAAGAGACTTGTTGCTTCTGAGAA
ATTGGTTAAAGTCAAAGCTTCTTTTAAGATTCCTTCTGCTAGATCCGCAGCAACACCTAA
ACCGGCTGCTCCGGTTAAGAAGAAGGCAACTGTAGTAGCTAAACCTAAGGGTAAGGTTGC
TGCTGCTGTTGCTCCTGCTAAAGCTAAAGCGGCGGCTAAAGGAACTAAGAAGCCTGCGGC
TAAAGTTGTTGCTAAGGCTAAGGTTACTGCTAAACCTAAGGCTAAGGTTACTGCTGCTAA
ACCTAAGTCTAAGTCTGTTGCTGCTGTTTCCAGACTAAAGCTGTTGCTGCTAAGCCTAAG
GCTAAG
   
Sequence Name 68-K034069-0022-406-H11C-JG78
GenBank Accession LN511948 [GenBank]
Sequencing primer gene specific primer, JG78: 5'-AGAAGCTTTAGCTGGTCTCTCCTT-3'
Sequence (A. th genome BLAST matches underlined)
>68-K034069-0022-406-H11C-JG78
TAGTCTTGGGAACAGCAGCAACAGACTTAGACTTAGGTTTAGCAGCAGTAACCTTAGCCT
TAGGTTTAGCAGTAACCTTAGCCTTAGCAACAACTTTAGCCGCAGGCTTCTTAGTTCCTT
TAGCCGCCGCTTTAGCTTTAGCAGGAGCAACAGCAGCAGCAACCTTACCCTTAGGTTTAG
CTACTACAGTTGCCTTCTTCTTAACCGGAGCAGCCGGTTTAGGTGTTGCTGCGGATCTAG
CAGAAGGAATCTTAAAAGAAGCTTTGACTTTAACCAATTTCTCAGAAGCAACAAGTCTCT
TGAGATTCACAAGCAAAAGCTTCCTAAAAGTAGGAGGCAGTGATTTATGTTTCTCCTCTA
TGAATTTCTGAATCGCGTATTGACTAGATCCAGTTCTCTCCTTCAACGTTACAATCGCAT
CTTTAATCATCTGCATCGAATTCAAACAAAATTCAAATTCCAAATCTATGAATCTGATAA
AAATTCAAAAAAAAAAAGTTTAAATCGAATATTGACCTCTTCATAGGTAGGGTGAGAGGA
AGTTGTTTTCTTCTTCGTTGGAGCAGCAGCTTTCACAGGCTTCTTCGTTGCTTTAGCCGT
CGTCGTCTTCTTAAATTTACCACCTTTCGCCGCCGGTTTCTTCTCCGGAGATTTCACCGT
TGTATCGGCAGCTCCTGAGTCAACAGTCGTTGGAACGTTTTCTTCCTCTATAGACATCTT
CTTCTCTCTCAAAAACTGATCTCTCTGTATTGATCGGAAGAAAATGTAATGCGTCGGAGA
ATTTTGTGATGAGGAGAAGGAAAAGAACTATGGGAATGATGTTTATATAGTCAGATAAAC
ACATCTGATTGGTTATATATTCAATTGTAAATGGCTTC

Last Updated on 06.12.2018 16:11