Sequences from confirmation amplicon


Confirmation sequences for line 434E08 and hit At1g35515 are shown.
Line ID 434E08
Locus At1g35515 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:13078177
Primers used for PCR NS39 - 8474, show primer details
   
Sequence Name 62-K113009-0022-434-E08C-NS39
GenBank Accession LN510799 [GenBank]
Sequencing primer gene specific primer, NS39: 5'-ATGGACATGCTCTAAGGAAAGAAA-3'
Sequence (A. th genome BLAST matches underlined)
>62-K113009-0022-434-E08C-NS39
AAGATACATACACCAACTTGGTCAAAGTCACTTCCTTTTTATAACACCTCTCTTTAGATC
CTAGTCTCACTCTTCTTGTCTCATCACCCACACATGTAACCATCATCATGGGAAGATCAC
CATGTTGTGAAAAGGCTCACATGAACAAAGGAGCATGGACTAAAGAAGAAGATCAACGTC
TTATTGATTATATACGTAATCATGGTGAAGGCTCTTGGCGTTCTCTTCCTAAATCCGTTG
GTAAATTTCTCCAAAGTTTTGATTTTTTTTCTTTCAAATTTTTATGTTTCTTGATCTGAT
GATTTTATCTTTTCTTTAGGGTTGTTGCGTTGTGGAAAAAGTTGTAGATTAAGATGGATT
AATTACCTTCGTCCTGATCTTAAACGTGGATCAGCAATGAGTATGATGGTCAATATGGAG
AAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTT
ATTA
   
Sequence Name 58-K113008-0022-434-E08C-8409
GenBank Accession LN509754 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>58-K113008-0022-434-E08C-8409
GGTATTATCCATCTTAATCACAACTTTTTCCACAACGCAACAACCCTAAAGAAAAGATAA
AATCATCAGATCAAGAAACATAAAAATTTGAAAGAAAAAAAATCAAAACTTTGGAGAAAT
TTACCAACGGATTTAGGAAGAGAACGCCAAGAGCCTTCACCATGATTACGTATATAATCA
ATAAGACGTTGATCTTCTTCTTTAGTCCATGCTCCTTTGTTCATGTGAGCCTTTTCACAA
CATGGTGATCTTCCCATGATGATGGTTACATGTGTGGGTGATGAGACAAGAAGAGTGAGA
CTAGGATCTAAAGAGAGGTGTTATAAAAAGGAAGTGACTTTGACCAAGTTGGTGTATGTA
TCTTGTATTTTGTGGGTGAAAAAGATTTGGTAGGTTACCTTCTTTTTCTTTCTTTCCTTA
GAGCATGTCCA

Last Updated on 06.12.2018 16:11