Sequences from confirmation amplicon


Confirmation sequences for line 470E06 and hit At5g11390 are shown.
Line ID 470E06
Locus At5g11390 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:3634371
Primers used for PCR BG16 - 8474, show primer details
   
Sequence Name 77-K101747-0022-470-E06C-8409
GenBank Accession LN513523 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>77-K101747-0022-470-E06C-8409
GCCTTTACAATTGAATATATCCTGTCATCCTCATCGGCTGGATGACATGAAAGCTATGAC
ATGAAAGCTCATCCTCAGTGAATATGATTCTCCAGAACGAGATTCAAAGCGCCCGTGTCA
TGATATCTCCGTTTCAACATGATGGAGAAGCTTTCTTGGATTTGGAAGGGAAGTTGAATG
ATACTGAACAATCTTTGGGTCAGTTAATGGAACAAGTAGTGGAAATGAAGAAGCAATCTT
CTAACTTTCAGAGGTTATCTTCTGGTTTGGATGAACAAGGAAGCTGTAAGTGACCAATCT
AGCTTTCTTTTTAACCTTGTTGTGATGATCACTTGGTGAGAAAAATTTCAGGCTTTAATG
AATACTATATAACTTTGTTTTTGCAGGGTCTGGAGGGCAAACTTCAGTGTCTCAAAACGA
TGGTGAGTTTGGTGATCTGAGCGCTAAGATCAATATGCAGACTGCTGATCAGCAAAGGAA
TGTTTTAAGGATGCTTGAGAAATCTTTGGCTAAGGAGATGGAACTTGAGAAGAAACTAAG
TGAATCAAGAAATACTGAACGAGAACTAGAGATGAAACTGTATTCTTCTGAGCAGGATGT
TGTCTAATTGGA
   
Sequence Name 77-K101753-0022-470-E06C-BG16
GenBank Accession LN513524 [GenBank]
Sequencing primer gene specific primer, BG16: 5'-TTCTTCCATGTAGACAACATCCTG-3'
Sequence (A. th genome BLAST matches underlined)
>77-K101753-0022-470-E06C-BG16
CTCTGTTCTCGTTCGTATTTCTTGATTCCTTAGTTTCTTCTCAAGTTCCATCTCCTTAGC
CAAAGATTTCTCAAGCATCCTTAAAACATTCCTTTGCTGATCAGCAGTCTGCATATTGAT
CTTAGCGCTCAGATCACCAAACTCACCATCGTTTTGAGACACTGAAGTTTGCCCTCCAGA
CCCTGCAAAAACAAAGTTATATAGTATTCATTAAAGCCTGAAATTTTTCTCACCAAGTGA
TCATCACAACAAGGTTAAAAAGAAAGCTAGATTGGTCACTTACAGCTTCCTTGTTCATCC
AAACCAGAAGATAACCTCTGAAAGTTAGAAGATTGCTTCTTCATTTCCACTACTTGTTCC
ATTAACTGACCCAAAGATTGTTCAGTATCATTCAACTTCCCTTCCAAATCCAAGAAAGCT
TCTCCATCATGTTGAAACGGAGATATCATGACACGGGCGCTTTGAATCTCGTTCTGGAGA
ATCATATTCACTGAGGATGAGCTTTCATGTCATAGCTTTCATGTCATCCAGCCGATGAGG
ATGACAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCA
ATGAGTATGATGGTCAATATGGAGAANAAGAAAGAGTAATTACCAATTTTTTTTCAATTC
AAAAATGTAGATGTCC

Last Updated on 06.12.2018 16:11