Sequences from confirmation amplicon


Confirmation sequences for line 471F06 and hit At3g18550 are shown.
Line ID 471F06
Locus At3g18550 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:6383987
Primers used for PCR PC08 - 8474, show primer details
   
Sequence Name 27-K024507-022-471-F06C-8409
GenBank Accession LN498215 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>27-K024507-022-471-F06C-8409
TAGATTTCCCGGACATGAAGCCATTTACAATTGAATAAATTGTAAATTCGGTGTTCATCT
ACATAGCTGTCACCCGGACTGCGCCCTCCTCACCTCTTTCCACCCAGAAAACAATGGCCA
TGATGATAACCAAACCATCCCAAACGACAATCATCATCCATCACTTCACTTTCCCTTGAA
CAACACCATTGTAGAACAACCCACTGAGCCCTCGGAAACTATAAACCTTATAGAAGATTC
CCAGAGAATCTCAACTTCTCAAGACCCAAAAATGAAAAAAGCCAAGAAACCCAGCAGAAC
GGACAGGCACAGCAAGATCAAAACGGCCAAAGGGACACGAGATCGTAGGATGAGACTCTC
GCTAGATGTCGCCAAAGAGTTGTTTGGCTTACAAGACATGCTTGGATTTGACAAAGCCAG
CAAAACCGTTGAATGGTTGCTTACACAAGCAAAACCTGAGATCATAAAGATCGCGACAAC
CCTTTCTCACCATGGCTGCTTCAGCAGCGGCGATGAGTCTCATATCCGTAAGTATCCATT
CTTTTCTAGTTTTAAGTCTATTCAAGTTTTCAACTTCTATGAATTTTTTTATATCATAAT
CTGAAAATTGTAAATTTCCTAATTAATTAAGGACCGGTGTTAGGATCCATGGACACATCT
TCTGATCTA
   
Sequence Name 28-K024507-022-471-F06C-PC08
GenBank Accession LN498682 [GenBank]
Sequencing primer gene specific primer, PC08: 5'-GGATGCAAGTTCACATAGATCAGA-3'
Sequence (A. th genome BLAST matches underlined)
>28-K024507-022-471-F06C-PC08
GTGTCCATGGATCCTAACACCGGTCCTTAATTAATTAGGAAATTTACAATTTTCAGATTA
TGATATAAAAAAATTCATAGAAGTTGAAAACTTGAATAGACTTAAAACTAGAAAAGAATG
GATACTTACGGATATGAGACTCATCGCCGCTGCTGAAGCAGCCATGGTGAGAAAGGGTTG
TCGCGATCTTTATGATCTCAGGTTTTGCTTGTGTAAGCAACCATTCAACGGTTTTGCTGG
CTTTGTCAAATCCAAGCATGTCTTGTAAGCCAAACAACTCTTTGGCGACATCTAGCGAGA
GTCTCATCCTACGATCTCGTGTCCCTTTGGCCGTTTTGATCTTGCTGTGCCTGTCCGTTC
TGCTGGGTTTCTTGGCTTTTTTCATTTTTGGGTCTTGAGAAGTTGAGATTCTCTGGGAAT
CTTCTATAAGGTTTATAGTTTCCGAGGGCTCAGTGGGTTGTTCTACAATGGTGTTGTTCA
AGGGAAAGTGAAGTGATGGATGATGATTGTCGTTTGGGATGGTTTGGTTATCATCATGGC
CATTGTTTTCTGGGTGGAAAGAGGTGAGGAGGGCGCAGTCCGGGTGACAGCTATGTAGAT
GAACACCGAATTTACAATTTATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATG
GATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTT
TTTCATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAA
AACGACAAATTACGATCCGTCGTAT

Last Updated on 06.12.2018 16:11