Sequences from confirmation amplicon


Confirmation sequences for line 498G06 and hit At5g09810 are shown.
Line ID 498G06
Locus At5g09810 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:3053897
Primers used for PCR HP63 - 8474, show primer details
   
Sequence Name 95-K033717-022-498-G06C-8409
GenBank Accession LN515328 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>95-K033717-022-498-G06C-8409
TTACATTGAATAATCCTGGACCATCATACCACTGAGAACGCCGTTACCATAGAGATCCTT
CCTGATATCGACATCACATTTCCTGAAGGAGTTGTAAGTTGTTTCATGGATTCCAGGAGC
TTCCATTCCGATGAGCGATGGCTGGAACAGAACCTCAGGACAACGGAATCTCTCAGCTCC
GATGGTTATGACTTGTCCATCAGGTAGCTCGTAGTTCTTCTCCACTGAAGAACTGCTCTT
GGCTGTCTCTAGCTCTTGCTCGTAGTCAAGAGCGACATAAGCAAGTTTCTCCTTTATGTC
ACGGACAATTTCCCGTTCTGCGGTAGTGGTGAACATGTAACCTCTCTCAGTGAGAATCTT
CATGAGTGAGTCTGTGAGATCCCGACCCGCAAGATCAAGACGAAGGATAGCATGAGGAAG
AGCATACCCCTCGTAGATTGGCACAGTGTGAGACACACCATCACCAGAATCGAGCACAAT
ACCTGTTACAAAA
   
Sequence Name 15-K033717-022-498-G06C-HP63
GenBank Accession LN492874 [GenBank]
Sequencing primer gene specific primer, HP63: 5'-TTTTTGTAACAGGTATTGTGCTCG-3'
Sequence (A. th genome BLAST matches underlined)
>15-K033717-022-498-G06C-HP63
CCATCTCGAGGGGTATGCTCTTCCTCATGCTATCCTTCGTCTTGATCTTGCGGGTCGGGA
TCTCACAGACTCACTCATGAAGATTCTCACTGAGAGAGGTTACATGTTCACCACTACCGC
AGAACGGGAAATTGTCCGTGACATAAAGGAGAAACTTGCTTATGTCGCTCTTGACTACGA
GCAAGAGCTAGAGACAGCCAAGAGCAGTTCTTCAGTGGAGAAGAACTACGAGCTACCTGA
TGGACAAGTCATAACCATCGGAGCTGAGAGATTCCGTTGTCCTGAGGTTCTGTTCCAGCC
ATCGCTCATCGGAATGGAAGCTCCTGGAATCCATGAAACAACTTACAACTCCATCATGAA
ATGTGATGTCGATATCAGGAAGGATCTCTATGGAAACATCGTTCTCAGTGGTATGATGGT
CCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATG
AGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAA
AATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATT
ACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTT
ATTTCGACGTGTCTACATTCACG

Last Updated on 06.12.2018 16:11