Sequences from confirmation amplicon


Confirmation sequences for line 499H06 and hit At5g20360 are shown.
Line ID 499H06
Locus At5g20360 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:6883523
Primers used for PCR LB12 - 8474, show primer details
   
Sequence Name 96-K033717-022-499-H06C-8409
GenBank Accession LN515368 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>96-K033717-022-499-H06C-8409
ATTTACATTGAATATAGAATCAATATTCAACGGATAAGATTGGCTGAGTTGCCTATAAAT
TGCACTCTCTTTAAACTTAGGGAAGTTGTTCATGAGCGTTTCCCAAGCTTAAGAGCAGTT
CATATAAAGTACAGGGACCAAGAAGGAGATTTAGTGACAATCACAACAGATGAAGAGTTA
AGAATGAGTGAGGTGTCATCAAGGTCACAGGGCACTATGAGGTTCTATGTAGTGGAAGTT
AGTCCTGAGCAGGATCCCTTTTTCGGAAGATTAGTTGAGATGAAGAAACTCAAAATTACT
GCTGATTCTTTTAAAGCAAAGGTAAACGGAAGAGGTGGATGTAAAGTTGAAGATTGGATG
ATTGAATTTGCTCATCTTTTTAAGATCCAGGCCAGAATTGATTCTGATAGATGCTTGAAT
CTTCAAGAACTTGGGATGAAACTTAATTCAGAAGCTATGGAGGAAGTGGTAACCTCCGAT
GCAGCTCAAGGTCCTTTTGACAGGGCAGCTCAGCAATTCCAAGAAGTTGCAGCTCGATCA
TTGTTAAACTTGGGA
   
Sequence Name 16-K033717-022-499-H06C-LB12
GenBank Accession LN493339 [GenBank]
Sequencing primer gene specific primer, LB12: 5'-ATCCCAAGTTTAACAATGATCGAG-3'
Sequence (A. th genome BLAST matches underlined)
>16-K033717-022-499-H06C-LB12
CTGCCCTGTCAAAGGACCTTGAGCTGCATCGGAGGTTACCACTTCCTCCATAGCTTCTGA
ATTAAGTTTCATCCCAAGTTCTTGAAGATTCAAGCATCTATCAGAATCAATTCTGGCCTG
GATCTTAAAAAGATGAGCAAATTCAATCATCCAATCTTCAACTTTACATCCACCTCTTCC
GTTTACCTTTGCTTTAAAAGAATCAGCAGTAATTTTGAGTTTCTTCATCTCAACTAATCT
TCCGAAAAAGGGATCCTGCTCAGGACTAACTTCCACTACATAGAACCTCATAGTGCCCTG
TGACCTTGATGACACCTCACTCATTCTTAACTCTTCATCTGTTGTGATTGTCACTAAATC
TCCTTCTTGGTCCCTGTACTTTATATGAACTGCTCTTAAGCTTGGGAAACGCTCATGAAC
AACTTCCCTAAGTTTAAAGAGAGTGCAATTTATAGGCAACTCAGCCAATCTTATCCGTTG
AATATTGATTCTAATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCA
GCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAA
TTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGA
CAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAA
ATCTTTATTTCGACGTGTCTACATTCC

Last Updated on 06.12.2018 16:11