Sequences from confirmation amplicon


Confirmation sequences for line 503F06 and hit At2g16390 are shown.
Line ID 503F06
Locus At2g16390 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:7098955
Primers used for PCR HF12 - 8474, show primer details
   
Sequence Name 44-K032522-022-503-F06C-8409
GenBank Accession LN505078 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>44-K032522-022-503-F06C-8409
CCATTTACTCATTGCAGATGTAGTGGAAGATTGTGAGCACTCATTTATTCTAAAGGACGA
TATGGGTTATGTTTGCCGTGTCTGCGGAGTTATTGAGAAAAGTATACTAGAGATAATTGA
TGTGCAATTCACTAAAGTAAGTATCCTATTTTCTGATACTACGCTAATTTGTGCTTTCAG
GGAAAAGTATGTTTCTTACTCGACAAATTTTGTTGTCTGAATACAATANGGGTAGGAGTT
CTTCATACATGTGGTCTATTTTCATTACCTCCATTATGCCTAGGGTTTTAAATTTTGTTA
TCAAATTGTTATGAAACCTGTAATATCCATATGATCTTGAAATTGTTTCCCAAGTCAGAG
TTTGGCGGAGCTTCTAATTTTTCTTGTAACTTTCACTGTAGGCAAAACGAAACACAAGAA
CATATGCCTCTGAAACTAGAACTAAAAGGTTTGGCGAATCTGATAATGAACTTAAGTTTT
CTGAAGAAG
   
Sequence Name 44-K032522-022-503-F06C-HF12
GenBank Accession LN505079 [GenBank]
Sequencing primer gene specific primer, HF12: 5'-TCATCAACCCTTCTTCAGAAAACT-3'
Sequence (A. th genome BLAST matches underlined)
>44-K032522-022-503-F06C-HF12
CCCAACCTTTAGTTCAGTTTCAGAGGCATATGTTCTTGTGTTTCGTTTTGCCTACAGTGA
AAGTTACAAGAAAAATTAGAAGCTCCGCCAAACTCTGACTTGGGAAACAATTTCAAGATC
ATATGGATATTACAGGTTTCATAACAATTTGATAACAAAATTTAAAACCCTAGGCATAAT
GGAGGTAATGAAAATAGACCACATGTATGAAGAACTCCTACCCTATTGTATTCAGACAAC
AAAATTTGTCGAGTAAGAAACATACTTTTCCCTGAAAGCACAAATTAGCGTAGTATCAGA
AAATAGGATACTTACTTTAGTGAATTGCACATCAATTATCTCTAGTATACTTTTCTCAAT
AACTCCGCAGACACGGCAAACATAACCCATATCGTCCTTTAGAATAAATGAGTGCTCACA
ATCTTCCACTACATCTGCAATGAGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCA
GCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAA
TTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGA
CAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAA
ATCTTTATTTCGACGTGTCTACATT

Last Updated on 06.12.2018 16:11