Sequences from confirmation amplicon


Confirmation sequences for line 509E02 and hit At5g63030 are shown.
Line ID 509E02
Locus At5g63030 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:25286765
Primers used for PCR SZ15 - 8474, show primer details
   
Sequence Name 51-K027489-022-509-E02C-8409
GenBank Accession LN507383 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>51-K027489-022-509-E02C-8409
GGGATGTGATCATGTAATATATACTGATAGATCCAGTTCTCAAATTTGATTCTGACTAGT
CTAGAAATCTTTGAAGAAGCTAGAGTTTTTGAAGATTGATCCGTGCAAGCTCCTATGACT
GATTTGGGGATGCCTTTCGGAGTTTTGAAATGAAGCTTAATTTGTTGTTGCTTAGAGTCT
TGAGTTTGATTTTGCTTAGTCTTAAAAGGAACGTATTTCTTTCCACTTTTTGAGATGGTC
TAAAGGTTACTTTTCAAATGTAATGTCTTAGCTCTGATCCATATTTTCTCTTTCGCAGCA
AGACATACTGTGGTTATTGCCAGAGGGTGAAGCAGTTACTGACGCAGCTAGGAGCAACTT
TTAAAGTACTTGAGCTCGATGAAATGAGTATGAAACCAAATCCCTGTCAATACCTGTATA
TTAATATATCTCAATGAACCTGAATTATCTCGATGCT
   
Sequence Name 52-K027489-022-509-E02C-SZ15
GenBank Accession LN507695 [GenBank]
Sequencing primer gene specific primer, SZ15: 5'-TCACCTGAAGTAAACATAGCATCG-3'
Sequence (A. th genome BLAST matches underlined)
>52-K027489-022-509-E02C-SZ15
ATATACAGGTATTGACAGGGATTTGGTTTCATACTCATTTCATCGAGCTCAAGTACTTTA
AAAGTTGCTCCTAGCTGCGTCAGTAACTGCTTCACCCTCTGGCAATAACCACAGTATGTC
TTGCTGCGAAAGAGAAAATATGGATCAGAGCTAAGACATTACATTTGAAAAGTAACCTTT
AGACCATCTCAAAAAGTGGAAAGAAATACGTTCCTTTTAAGACTAAGCAAAATCAAACTC
AAGACTCTAAGCAACAACAAATTAAGCTTCATTTCAAAACTCCGAAAGGCATCCCCAAAT
CAGTCATAGGAGCTTGCACGGATCAATCTTCAAAAACTCTAGCTTCTTCAAAGATTTCTA
GACTAGTCAGAATCAAATTTGAGAACTGGATCTATCAGTATATATTACATGATCACATCC
CTAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATG
GAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGC
GTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTAT
AGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATNTCGACGTGTCTAC

Last Updated on 06.12.2018 16:11