Sequences from confirmation amplicon


Confirmation sequences for line 563G04 and hit At5g47640 are shown.
Line ID 563G04
Locus At5g47640 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:19309725
Primers used for PCR PG17 - 8474, show primer details
   
Sequence Name 52-K101746-0022-563-G04C-8409
GenBank Accession LN507766 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>52-K101746-0022-563-G04C-8409
TCGGACTGAGCCTTTACATTGAAGCCATTGCTGAGCCATTGAAAGTTTACTTGCAGAGGT
TTAGGGAGATCGAAGGGGAGAGGACTGGACTAGGGAGGCCACAGACTGGTGGTGAGGTCG
GAGAGCATCAGAGAGATGCTGTCGGAGATGGCGGTGGGTTCTACGGTGGTGGTGGTGGGA
TGCAGTATCACCAACATCATCAGTTTCTTCACCAGCAGAACCATATGTATGGAGCCACAG
GTGGCGGTAGCGACAGTGGAGGTGGAGCTGCCTCCGGTAGGACAAGGACTTAACAAAGAT
TGGTGAAGTGGATCTCTCTCTGTATATAGATACATAAATACATGTATACACATGCCTATT
TTTACGACCCATATAAGGTATCTATCATGTGATAGAACGAACATTGGTGTTGGTGATGTA
AAATC
   
Sequence Name 52-K101752-0022-563-G04C-PG17
GenBank Accession LN507767 [GenBank]
Sequencing primer gene specific primer, PG17: 5'-TGATTTTACATCACCAACACCAAT-3'
Sequence (A. th genome BLAST matches underlined)
>52-K101752-0022-563-G04C-PG17
TTATATGGGTCGTAAAATAGGCATGTGTATACATGTATTTATGTATCTCTATACAGAGAG
AGATCCACTTCACCAATCTTTGTTAAGTCCTTGTCCTACCGGAGGCAGCTCCACCTCCAC
TGTCGCTACCGCCACCTGTGGCTCCATACATATGGTTCTGCTGGTGAAGAAACTGATGAT
GTTGGTGATACTGCATCCCACCACCACCACCGTAGAACCCACCGCCATCTCCGACAGCAT
CTCTCTGATGCTCTCCGACCTCACCACCAGTCTGTGGCCTCCCTAGTCCAGTCCTCTCCC
CTTCGATCTCCCTAAACCTCTGCAAGTAAACTTTCAATGGCTCAGCAATGGCTTCAATTG
TAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATG
GAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGC
GTTATT

Last Updated on 06.12.2018 16:11