Sequences from confirmation amplicon


Confirmation sequences for line 565F11 and hit At2g01320 are shown.
Line ID 565F11
Locus At2g01320 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:158135
Primers used for PCR RT03 - 8474, show primer details
   
Sequence Name 29-K025945-022-565-F11C-8409
GenBank Accession LN499136 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>29-K025945-022-565-F11C-8409
TTTGAAGGCTTTACCTCACCGGAGCTTCCAAGTAGAAGACGACACTGAGTCACTGACACA
GGGATACAAATTATGGCGCCTTTTGGCGGGAAATCTTTAGCGGACGTTGTTTCTGGCATC
GGAGGGAATGGTGTTGGCGGGGCTCTGGCTGCGGTGGCCGCCGCTCTGTTGGTCCGCCTC
TTCGCTGGACCTGGCATCGCTCTCTTACCTGAAGACGAAGCTGAAGATGATTACGCTGAG
ACGGAAGACGGTGGTGGTGATTCAATTCGTCCGGTGACAATCCGTTGGAGGAACATCACC
TGCTCGCTCTCCGATAAGTCCTCCAAATCGGTGAGCACATTTCTTCTCCTTTTGCATGTT
TCGATTGCGCGTATATTAGTCTTTCCAATTTCACGTTAATAGCCGAATCAGAATTGGTTG
ATTATGTGATTCTCAGGTGAGGTTTTTGTTGAAAAATGTATCCGGAGAAGCAAAACCTGG
GAGGTTGCTAGCGATTATGGGTCCTTCTGGTTCTGGGAAAACAACATTGCTCAATGTTTT
AGCAGGACAGCTTAGTTTATCTCCACGTTTGCATTTGTC
   
Sequence Name 30-K025945-022-565-F11C-RT03
GenBank Accession LN499573 [GenBank]
Sequencing primer gene specific primer, RT03: 5'-TAACCTCCAAGAGACCTGACAAAT-3'
Sequence (A. th genome BLAST matches underlined)
>30-K025945-022-565-F11C-RT03
GTGGAGATAAACTAAGCTGTCCTGCTAAAACATTGAGCAATGTTGTTTTCCCAGAACCAG
AAGGACCCATAATCGCTAGCAACCTCCCAGGTTTTGCTTCTCCGGATACATTTTTCAACA
AAAACCTCACCTGAGAATCACATAATCAACCAATTCTGATTCGGCTATTAACGTGAAATT
GGAAAGACTAATATACGCGCAATCGAAACATGCAAAAGGAGAAGAAATGTGCTCACCGAT
TTGGAGGACTTATCGGAGAGCGAGCAGGTGATGTTCCTCCAACGGATTGTCACCGGACGA
ATTGAATCACCACCACCGTCTTCCGTCTCAGCGTAATCATCTTCAGCTTCGTCTTCAGGT
AAGAGAGCGATGCCAGGTCCAGCGAAGAGGCGGACCAACAGAGCGGCGGCCACCGCAGCC
AGAGCCCCGCCAACACCATTCCCTCCGATGCCAGAAACAACGTCCGCTAAAGATTTCCCG
CCAAAAGGCGCCATAATTTGTATCCCTGTGTCAGTGACTCAGTGTCGTCTTCTACTTGGA
AGCTCCGGTGAGGTAAAGCCTTCAAATCAGCAATGAGTATGATGGTCAATATGGAGAAAA
AGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTA
TAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAA
AGCAATAAACAAATTATTCTAATTCGGAAATCT

Last Updated on 06.12.2018 16:11