Sequences from confirmation amplicon


Confirmation sequences for line 574D07 and hit At5g35110 are shown.
Line ID 574D07
Locus At5g35110 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:13364465
Primers used for PCR KG29 - 8474, show primer details
   
Sequence Name 08-K104193-0022-574-D07C-KG29
GenBank Accession LN489709 [GenBank]
Sequencing primer gene specific primer, KG29: 5'-CAAGGGTAGAAATAGACGAAGACG-3'
Sequence (A. th genome BLAST matches underlined)
>08-K104193-0022-574-D07C-KG29
AGAGAAGAGAGGCAGATGCAGAGCCAACTGTTTCCTTCACTCCAGATCGTTGGATAGGGA
ACATAACGACCTCAGACCTTCCATGACGACAAGGAGTCGCTGAACCTCCACCGCGAGATC
TCTCGTGAAGGGCACAACCGCAGTTCTTGTGGTATGGACGTCGTTGGATGGAAGAGTCAC
AGCTAGAGATGCAACCTTCAAAGATGTTGCGGAATATTCCGTCCATGGATCCGGCAGCCA
TCACGACAATCTTCTTGATCTTTCTCTTTTTTGTTACGAAGGAGATTTTTTTAAATTCCC
CGACGTGAACGAAGAGTGAAACGCGTTTGTGGTTGACGAAGAGAGTTTTCTTTTGTTGTT
GTCAAAAAATGAATTCTGATTTTTAGGGTTACTAGAGATTCTTTTTTTATAGCCATGCAG
AAATAGTAGTTTCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATG
GATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTT
TTCAATTCAAAAATGTAGATGTCCGCACGGTT
   
Sequence Name 24-K104194-0022-574-D07C-8409
GenBank Accession LN496970 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>24-K104194-0022-574-D07C-8409
CGGACATGAGCCATTTACATTGAATATATCCTGAAACTACTATTTCTGCATGGCTATAAA
AAAAGAATCTCTAGTAACCCTAAAAATCAGAATTCATTTTTTGACAACAACAAAAGAAAA
CTCTCTTCGTCAACCACAAACGCGTTTCACTCTTCGTTCACGTCGGGGAATTTAAAAAAA
TCTCCTTCGTAACAAAAAAGAGAAAGATCAAGAAGATTGTCGTGATGGCTGCCGGATCCA
TGGACGGAATATTCCGCAACATCTTTGAAGGTTGCATCTCTAGCTGTGACTCTTCCATCC
AACGACGTCCATACCACAAGAACTGCGGTTGTGCCCTTCACGAGAGATCTCGCGGTGGAG
GTTCAGCGACTCCTTGTCGTCATGGAAGGTCTGAGGTCGTTATGTTCCCTATCCAACGAT
CTTGGAGTGAAGGAAACAGTTTGGCTCTGCATCTTGCCTCATCTTCTTCTTCCTCTAACC
TCCAGTCACTTTCGTCGTCTTCGTCGTATTCTACCC

Last Updated on 06.12.2018 16:11