Sequences from confirmation amplicon


Confirmation sequences for line 606F07 and hit At5g12860 are shown.
Line ID 606F07
Locus At5g12860 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:4062158
Primers used for PCR RU31 - 8474, show primer details
   
Sequence Name 59-K023021-022-606-F07C-8409
GenBank Accession LN509871 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>59-K023021-022-606-F07C-8409
GTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATTTACGAAAAGCCATTTTGG
GTTTGGGTTTGGTCTTTTTAGATCGACGAAACATACAAAGCAAAATCCTTCACTCAACAA
ATTTTCTATTGATTTATTAGCTTTGTTTTTTGGTTTTGAAAGATCTTAAACTATGCGTTT
ACTAGTGGATCGTCCAATGAAAGATTAACTGGCAATAGAATAGTAGCTTTCATTACATTG
TCCAAGATGGGCCGAGATGGCTTCGCTTGGAATTAAATCTAGTGTAAACCCTTAAGCGGC
CTCTCGTTTTTTTTTCTTTGAGTGTTATATGGTTCATAGTTTTGATTTGTTTGTTTAGAG
TAAGGTGTGACATCAAATATTGAATACATGATTCTTTTATGTAAGAGGATACTTTCTAAT
GTGAATGTCTAAGAAAGTTACCAAATGTTTTAAAGTACATTCAATAAAACAAAATGTTCA
GTTTTATCCAAAGATATAACATCAGAAAAACTTTCATTTAATTAGTTCAATCTTC
   
Sequence Name 60-K023021-022-606-F07C-RU31
GenBank Accession LN510139 [GenBank]
Sequencing primer gene specific primer, RU31: 5'-CAAGTAGCAATGGAGAAGATTGAA-3'
Sequence (A. th genome BLAST matches underlined)
>60-K023021-022-606-F07C-RU31
TAATTAAATGAAAGTTTTTCTGATGTTATATCTTTGGATAAAACTGAACATTTTGTTTTA
TTGAATGTACTTTAAAACATTTGGTAACTTTCTTAGACATTCACATTAGAAAGTATCCTC
TTACATAAAAGAATCATGTATTCAATATTTGATGTCACACCTTACTCTAAACAAACAAAT
CAAAACTATGAACCATATAACACTCAAAGAAAAAAAAACGAGAGGCCGCTTAAGGGTTTA
CACTAGATTTAATTCCAAGCGAAGCCATCTCGGCCCATCTTGGACAATGTAATGAAAGCT
ACTATTCTATTGCCAGTTAATCTTTCATTGGACGATCCACTAGTAAACGCATAGTTTAAG
ATCTTTCAAAACCAAAAAACAAAGCTAATAAATCAATAGAAAATTTGTTGAGTGAAGGAT
TTTGCTTTGTATGTTTCGTCGATCTAAAAAGACCAAACCCAAACCCAAAATGGCTTTTCG
TAAATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAG
TATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAA
TGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTAC
GATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTAT
TTCGACGTGTCTA

Last Updated on 06.12.2018 16:11