Sequences from confirmation amplicon


Confirmation sequences for line 624A04 and hit FCAALL are shown.
Line ID 624A04
Locus FCAALL [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:8400099
Primers used for PCR JV06 - 8474, show primer details
   
Sequence Name 68-K032929-022-624-A04C-8409
GenBank Accession LN511938 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>68-K032929-022-624-A04C-8409
TTGAATATAATGGAGAATTTGTTGAGATGGTGTGAACACGAAGTAGTAACAACTAACAAG
GTAATTAAGGATCATTGGCTTATATAATAAATAGATTTAGAAAAAGTAATCAGTCAATGT
TGATCATCATCTTGACAAATTCATCATAATTGACTTGGCCATCACCATCCAAATCTGCCT
CCTTTATCATTTGTTCAACTTCTTCATCTGTTAGCTTTTCTCCTAGATTTATCATTACAT
GACTCAACTGCAATAACAAAGCTTTTCAAATTAATAAATAATTAACGTAATTGTTAGTCT
AATTATTGTAAATTAAGTTGTGCATGTTAATCAGACGGGTCTGACCCTGTACAGAGAATA
ATAATTGTTTATTATCCATTTGAATATGCAATACAATATAGTAGGTCAAACGGCCTAAC
   
Sequence Name 68-K032929-022-624-A04C-JV06
GenBank Accession LN511939 [GenBank]
Sequencing primer gene specific primer, JV06: 5'-TAGAAATTGTTCAAGTTAGGCCGT-3'
Sequence (A. th genome BLAST matches underlined)
>68-K032929-022-624-A04C-JV06
TATTCAATGGATAATAAACAATTATTATTCTCTGTACAGGGTCAGACCCGTCTGATTAAC
ATGCACAACTTAATTTACAATAATTAGACTAACAATTACGTTAATTATTTATTAATTTGA
AAAGCTTTGTTATTGCAGTTGAGTCATGTAATGATAAATCTAGGAGAAAAGCTAACAGAT
GAAGAAGTTGAACAAATGATAAAGGAGGCAGATTTGGATGGTGATGGCCAAGTCAATTAT
GATGAATTTGTCAAGATGATGATCAACATTGACTGATTACTTTTTCTAAATCTATTTATT
ATATAAGCCAATGATCCTTAATTACCTTGTTAGTTGTTACTACTTCGTGTTCACACCATC
TCAACAAATTCTCCATTATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGG
ATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTT
TCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAA
ACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTC
GGAAATCTTTATTTCGACGTGTCTACATT

Last Updated on 06.12.2018 16:11