Sequences from confirmation amplicon


Confirmation sequences for line 640E09 and hit At1g03040 are shown.
Line ID 640E09
Locus At1g03040 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:704957
Primers used for PCR 09ih - 8474, show primer details
   
Sequence Name 33-K112776-0022-640-E09C-09ih
GenBank Accession LN501063 [GenBank]
Sequencing primer gene specific primer, 09ih: 5'-TAATGGCATTTCAGTGACTAGTGG-3'
Sequence (A. th genome BLAST matches underlined)
>33-K112776-0022-640-E09C-09ih
TGCCATAGTTGACCAGAGATAAAGCTTATGAAGGAAAAATATTATCAAAGCCCATCATTG
CATAAAATATTCTTCAATGTTCTCATTAGCTTTATTACAATAGTCCTCAATTGTGATGAT
TCTCCATGGGAGGGAAGCAAGCAAAAAGTGAAAGACACTAATGCCAAAAAACACACAATC
ATGTACTCTTTGATTACTCTTTATTGCCAGATTAAACAATTATAATCTTTTATTAAGATT
GGAAGTTTGGTTTAAGAGAGTAGGTGGTGGTGGGGACCAAGGATTTACCAATTGTCAAAC
ACTGATCATGGCTTCCATCAGTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAG
CAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAAT
TCAAAAATGTAGATGTCCGCACGATTATAAT
   
Sequence Name 10-K112774-0022-640-E09C-8409
GenBank Accession LN490732 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>10-K112774-0022-640-E09C-8409
TGATGGAAGCCATGATCAGTGTTTGACAATTGGTAAATCCTTGGTCCCCACCACCACCTA
CTCTCTTAAACCAAACTTCCAATCTTAATAAAAGATTATAATTGTTTAATCTGGCAATAA
AGAGTAATCAAAGAGTACATGATTGTGTGTTTTTTGGCATTAGTGTCTTTCACTTTTTGC
TTGCTTCCCTCCCATGGAGAATCATCACAATTGAGGACTATTGTAATAAAGCTAATGAGA
ACATTGAAGAATATTTTATGCAATGATGGGCTTTGATAATATTTTTCCTTCATAAGCTTT
ATCTCTGGTCAACTATGGCAGGTCCTGAGCATGAGCCGTCTTGGTGGAGCCGGTGCTGTC
GCACCACTAGTCACTGAATTGCCATT

Last Updated on 06.12.2018 16:11