Sequences from confirmation amplicon


Confirmation sequences for line 641D12 and hit At2g40620 are shown.
Line ID 641D12
Locus At2g40620 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:16956927
Primers used for PCR TD03 - 8474, show primer details
   
Sequence Name 55-K027356-022-641-D12C-8409
GenBank Accession LN508692 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>55-K027356-022-641-D12C-8409
AGCATTTCATTGAATAGACAGAGGGCGCGAAACAGAGAGAAAATAAGAAGAAGAAGGACG
ATCCAGATATGGAGGATCCTTCTAACCCACAACCAAACCAGAGCAATCTCTCGCAATGCC
CGCCTTTAGCCACAGCTCCGACACCTGCGCCAGTTCGTGGTCCGTACCACCGGAGAGCAC
ATTCGGAGGTCCAATTCCGTCTCCCTGAAGATCTGGATCTCTCTGAACCATTCGGAGGAT
TCGATGAGCTTGGATCCGAAGATGATCTCTTTTGCTCATACATGGACATTGAGAAACTTG
GATCCGGATCCGGATCCGCATCCGATTCGGCTGGTCCTTCTGCTCCTAGGTCTGATAACC
CGTTTTCCGCTGAGAATGGAGGTGCGGAGGCTGGGAATTCGAGACCTCGACACAGGCATA
GCCTCTCCGTTGATGGCTCTTCGACTTTGGAGTCAATTGAGGCTAAGAAAGCTATGGCTC
CTGATAAGCTCGCTGAGCTTTGGGTCGTCGACCC
   
Sequence Name 56-K027356-022-641-D12C-TD03
GenBank Accession LN508989 [GenBank]
Sequencing primer gene specific primer, TD03: 5'-AACCTTTTAGCTCTTTTAGGGTCG-3'
Sequence (A. th genome BLAST matches underlined)
>56-K027356-022-641-D12C-TD03
CATAGCTTTCTTAGCCTCAATTGACTCCAAAGTCGAAGAGCCATCAACGGAGAGGCTATG
CCTGTGTCGAGGTCTCGAATTCCCAGCCTCCGCACCTCCATTCTCAGCGGAAAACGGGTT
ATCAGACCTAGGAGCAGAAGGACCAGCCGAATCGGATGCGGATCCGGATCCGGATCCAAG
TTTCTCAATGTCCATGTATGAGCAAAAGAGATCATCTTCGGATCCAAGCTCATCGAATCC
TCCGAATGGTTCAGAGAGATCCAGATCTTCAGGGAGACGGAATTGGACCTCCGAATGTGC
TCTCCGGTGGTACGGACCACGAACTGGCGCAGGTGTCGGAGCTGTGGCTAAAGGCGGGCA
TTGCGAGAGATTGCTCTGGTTTGGTTGTGGGTTAGAAGGATCCTCCATATCTGGATCGTC
CTTCTTCTTCTTATTTTCTCTCTGTTTCGCGCCCTCTGTCTATTCAATTGTAAATGGCTT
CATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGA
AAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAA
AATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGC
AATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCT

Last Updated on 06.12.2018 16:11