Sequences from confirmation amplicon


Confirmation sequences for line 650E07 and hit At5g47920 are shown.
Line ID 650E07
Locus At5g47920 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:19404127
Primers used for PCR NS19 - 8474, show primer details
   
Sequence Name 83-K102372-0022-650-E07C-8409
GenBank Accession LN514292 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>83-K102372-0022-650-E07C-8409
TTACATTGAATAATCCTGGAAGGGCTCTCACCTCCAATGTTCCTTTCCATGCTAATTAAG
CAACATCCAAAACATAAGTAAAACACTATTATAGAAGCTCTTACAAAGAAAAAATATGAA
GAAAGCTACGGCATTGATGAAACATATCGTTGCATTGTTGAGTTCCATGGCGAAGGCAAA
ATCTATAGCCATAAAGAACAAAACGAGTGCTTTCAAGACACGAGTACTCATGTTGTCTCT
AGTGAAACACAAGAAACTCGGGTTCCGTTCCATTTCCAACAAGATTCACCACCTCTTGGG
CCATGCGGATCAAGACGACGATAACGACCAGGACCAAGACAAGAACAAGGCTATAGTCCT
CTACAACAGCAAGGCATCCACAATGGCTCATCATGAGGAATATGACGTTCACGAGGAGGA
AAGCGACAAGTATCCTGATCTGAGGCACACGTTGTTCGAAGGAGAGGAGGACTTCGGGGA
CTTGGAGGAGGAAGGTCAAGGTAGTTC
   
Sequence Name 83-K102373-0022-650-E07C-NS19
GenBank Accession LN514293 [GenBank]
Sequencing primer gene specific primer, NS19: 5'-AGAACTACCTTGACCTTCCTCCTC-3'
Sequence (A. th genome BLAST matches underlined)
>83-K102373-0022-650-E07C-NS19
CACGTGTGCCTCAGATCAGGATACTTGTCGCTTTCCTCCTCGTGAACGTCATATTCCTCA
TGATGAGCCATTGTGGATGCCTTGCTGTTGTAGAGGACTATAGCCTTGTTCTTGTCTTGG
TCCTGGTCGTTATCGTCGTCTTGATCCGCATGGCCCAAGAGGTGGTGAATCTTGTTGGAA
ATGGAACGGAACCCGAGTTTCTTGTGTTTCACTAGAGACAACATGAGTACTCGTGTCTTG
AAAGCACTCGTTTTGTTCTTTATGGCTATAGATTTTGCCTTCGCCATGGAACTCAACAAT
GCAACGATATGTTTCATCAATGCCGTAGCTTTCTTCATATTTTTTCTTTGTAAGAGCTTC
TATAATAGTGTTTTACTTATGTTTTGGATGTTGCTTAATTAGCATGGAAAGGAACATTGG
AGGTGAGAGCCCTTCCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTAC
ATGGATCAGCAATGAGTATGATGGTCAATA

Last Updated on 06.12.2018 16:11