Sequences from confirmation amplicon


Confirmation sequences for line 654A12 and hit At1g45688 are shown.
Line ID 654A12
Locus At1g45688 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:17192270
Primers used for PCR LD22 - 8474, show primer details
   
Sequence Name 41-K030903-022-654-A12C-8409
GenBank Accession LN503965 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>41-K030903-022-654-A12C-8409
AATTGAATATATCTCGGCCACCACCAGTATCAGTTCCTACACCACTCAGCATTCTTGACC
AGCTTGGATCTTATGCGTCTCAAAACGTTATACTCCGCAAATTCCAATCACCAAAACCTA
AATCATCAGAATCTAAATTTGGAAATTCAGAGATCTCGAATCGACTTCAAATCAACGAGT
GTCTACTTCCAAATTTCTTTAAAGATCTACTAAATTCAAGCTCGAATTAAGCTAACTAGA
AGTAGAAACACCAATCTAATTTCAAGATCTGAATCAACTTTACTAAAATTGAAGGAAGAA
TTTGAATCTAACCTTGACAGTGATCTTAGGTTTCATAGGTTTAGCAG
   
Sequence Name 42-K030903-022-654-A12C-LD22
GenBank Accession LN504349 [GenBank]
Sequencing primer gene specific primer, LD22: 5'-GATTCTCTATGGTGCTGCTAAACC-3'
Sequence (A. th genome BLAST matches underlined)
>42-K030903-022-654-A12C-LD22
AAGAAAATTTCGGAAGTAGACACTCGTCGATTTGAAGTCAATTCAGATCTCTGAAATTTC
CAAATTTAGATCTGATGATTTAGGTTTCGGTGATTGGAAATTTGCAGAGTATAACATTTG
AGACGCTTAAGATCCAAGCTGGTCAAGATGCTGGTGGTGTAGGAACTGATACTGGTGGTG
GCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATG
AGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAA
AATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATT
ACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTT
ATTTCGACGTGTCTA

Last Updated on 06.12.2018 16:11