Sequences from confirmation amplicon


Confirmation sequences for line 684G12 and hit At3g01970 are shown.
Line ID 684G12
Locus At3g01970 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:327262
Primers used for PCR IS69 - 8474, show primer details
   
Sequence Name 13-K024917-022-684-G12C-8409
GenBank Accession LN491870 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>13-K024917-022-684-G12C-8409
GGACATGAAGCCATTTACAATTGAATATATATTGAAAATATGGCTACATTAGCGGATCCA
TCACAGAAAAAGAGTTTTGTGGAAACAAAAAGGTGTGGCGGCTACATCATTCTGATTTAT
ATTATTATATATGCAACTCCTTCAAATTTTGGTTCAATGGATTCAAATTTCAAACATATT
TCTTGGTCAAGAATCAATATGCATCTAGATCTCTGAGGTAATCATTCTTTTCTTATTTGA
TTTACAATTTGGATTAGCAAGGTTTCCAAGATAATATCCAATATCACGTGTATTTGAGGT
TCACCTACCAAACTTGATTGAATTCAATAAACAATGAGCTCGAATGATGTTGAGATTGTT
GACTATTTTGGCTCTTTGCTTTCTTCTATACTTGTCAAAAGTATATAATCATTGATTCCA
TGGATTATTCATCCCTCCATAGTTATTCAAACTTGATTCATATTCACTTTTTACACACAA
CATAGAATTATAATAATACTAGGCATTGATCACATGTAGGATTTGAGACGGGGTCGCGTA
AGGGACTGCGCTCCATCCACCAAGACAGTGGTGCCTGTCATGAAGCGTGAGCCATCGCTG
ATCAGGG
   
Sequence Name 14-K024917-022-684-G12C-IS69
GenBank Accession LN492340 [GenBank]
Sequencing primer gene specific primer, IS69: 5'-TGTTATCTACTTGATCAGCGATGG-3'
Sequence (A. th genome BLAST matches underlined)
>14-K024917-022-684-G12C-IS69
TTCATGACAGGCACCACTGTCTTGGTGGATGGAGCGCAGTCCCTTACGCGACCCCGTCTC
AAATCCTACATGTGATCAATGCCTAGTATTATTATAATTCTATGTTGTGTGTAAAAAGTG
AATATGAATCAAGTTTGAATAACTATGGAGGGATGAATAATCCATGGAATCAATGATTAT
ATACTTTTGACAAGTATAGAAGAAAGCAAAGAGCCAAAATAGTCAACAATCTCAACATCA
TTCGAGCTCATTGTTTATTGAATTCAATCAAGTTTGGTAGGTGAACCTCAAATACACGTG
ATATTGGATATTATCTTGGAAACCTTGCTAATCCAAATTGTAAATCAAATAAGAAAAGAA
TGATTACCTCAGAGATCTAGATGCATATTGATTCTTGACCAAGAAATATGTTTGAAATTT
GAATCCATTGAACCAAAATTTGAAGGAGTTGCATATATAATAATATAAATCAGAATGATG
TAGCCGCCACACCTTTTTGTTTCCACAAAACTCTTTTTCTGTGATGGATCCGCTAATGTA
GCCATATTTTCAATATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGA
TCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTT
CAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAA
CGACAAATTACGATCCGTCGTATTTATAG

Last Updated on 06.12.2018 16:11