Sequences from confirmation amplicon


Confirmation sequences for line 689C11 and hit At1g72750 are shown.
Line ID 689C11
Locus At1g72750 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:27383619
Primers used for PCR PF77 - 8474, show primer details
   
Sequence Name 64-K102872-0022-689-C11C-8409
GenBank Accession LN511174 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>64-K102872-0022-689-C11C-8409
GCCTTTCTTTTTGTTATTGATGTTTTCGTCTGACCCATGATCGGATCTGTTATTAGCCGC
CATCGATGGAAGAGAAAAGTCTAGGTTTTAAGGATTTTGGTGGTGGCTAGAGAGAGAGAG
ACGACGGAGAGGAAAGAGAGAGAGAGAAACGTGTGATGATGTGGTTGTGTTGTGTCTCTC
TGAATGTTTGGTTTGGTTGCCGAAATGAGAAATGAAACCAAACTAAACTAAAAATCTATG
TTTAGGGTTTTTAGGGAAAGACTCAGTCCAGTTGTTTCCAGATACGCGCAGTACCAGATT
CGCTTAATACTCGCGTTTA
   
Sequence Name 64-K102873-0022-689-C11C-PF77
GenBank Accession LN511175 [GenBank]
Sequencing primer gene specific primer, PF77: 5'-GTAAACGCGAGTATTAAGCGAATC-3'
Sequence (A. th genome BLAST matches underlined)
>64-K102873-0022-689-C11C-PF77
AGTCTTTCCCTAAAACCCTAAACATAGATTTTTAGTTTACCTTGGAAGCATTTCTCATTT
CGGCAACCAAACCAAACATTCAGAGAGACACAACACAACCACATCATCACACGTTTCTCT
CTCTCTCTTTCCTCTCCGTCGTCTCTCTCTCTCTAGCCACCACCAAAATCCTTAAAACCT
AGACTTTTCTCTTCCATCGATGGCGGCTAATAACAGATCCGATCATGGGTCAGACGAAAA
CATCAATAAACAAAAAGAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAG
TATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAA
TGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTAC
GATCCGTCGTATTTATGGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTAT
TTCGACGTGTCTACNTTCACGTCCAAATGGGA

Last Updated on 06.12.2018 16:11