Sequences from confirmation amplicon


Confirmation sequences for line 734C01 and hit At3g45640 are shown.
Line ID 734C01
Locus At3g45640 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:16756651
Primers used for PCR SR02 - 8474, show primer details
   
Sequence Name 58-K028101-022-734-C01C-8409
GenBank Accession LN509596 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>58-K028101-022-734-C01C-8409
ACGAAGTCACAACGAACAGAAACCGTCGATTTGAGGCGGCTCTAATCTCAACCACACGAT
CTTCTCTGCCTTTCCCTCTTCTCTCTTCTTCTTCTTCTTCATCTTCTTCCTCGCAATTAC
CGCGAAAACTCATCTCTGCTCAATCCTCAATCTCAGTCTCTCTGTTGACTCCGACTGTTA
TATAAAACCATACAAATACCTTCAGATTCACTACTTCAAACCTCAAAGCAACCACTGAAT
CTCGACTTTGATCAATTGAGAGAGAAATGAACACCGGCGGTGGCCAATACACGGATTTTC
CGGCGGTGGAAACTCACGGAGGACAGTTCATAAGTTACGATATCTTCGGTAGTTTATTCG
AGATCACATCTAAGTATCGTCCTCCGATTATACCAATTGGTCGTGGAGCTTATGGAATCG
TTTGGTATGTTTCCTTCTCTGAGCTTTTTCTTAAGTTTTATTCTTTGAGATCGGAGTTTT
TAATTTCTGGATTTTGATTTTGTGAAGCTCTGTGTTGGATACGGAGACGAACGAGCTAGT
AGCGATGAAGAAGATAGCTAATGCTTTTGATAATCATATGGATGCTAAGCGTACGCTTCG
TGAGATCAAGCTTCTTCGTCATCTTGATCATGAAAACGTTAGTGTTTTTGTTCGATTTTG
TGAAATATCTGTAGAAATTAGTAAATAAATCATGATTAGGGTTTTTTGATTTGGTATTGC
AACAGATTATAGCTATAAGAGATGTTGTTCCACCACCA
   
Sequence Name 58-K028101-022-734-C01C-SR02
GenBank Accession LN509597 [GenBank]
Sequencing primer gene specific primer, SR02: 5'-TGAACTGTCTTCTTAGTGGTGGTG-3'
Sequence (A. th genome BLAST matches underlined)
>58-K028101-022-734-C01C-sr2
TTATCTGTTGCATACCAAATCAAAAAACCCTAATCATGATTTATTTACTAATTTCTACAG
ATATTTCACAAAATCGAACAAAAACACTAACGTTTTCATGATCAAGATGACGAAGAAGCT
TGATCTCACGAAGCGTACGCTTAGCATCCATATGATTATCAAAAGCATTAGCTATCTTCT
TCATCGCTACTAGCTCGTTCGTCTCCGTATCCAACACAGAGCTTCACAAAATCAAAATCC
AGAAATTAAAAACTCCGATCTCAAAGAATAAAACTTAAGAAAAAGCTCAGAGAAGGAAAC
ATACCAAACGATTCCTTAAGCTCCACGACCAATTGGTATAATCGGAGGACGATACTTAGA
TGTGATCTCGAATAAACTACCGAAGATATCGTAACTTATGAACTGTCCTCCGTGAGTTTC
CACCGCCGGAAAATCCGTGTATTGGCCACCGCCGGTGTTCATTTCTCTCTCAATTGATCA
AAGTCGAGATTCAGTGGTTGCTTTGAGGTTTGAAGTAGTGAATCTGAAGGTATTTGTATG
GTTTTATATAACAGTCGGAGTCAACAGAGAGACTGAGATTGAGGATTGAGCAGAGATGAG
TTTTCGCGGTAATTGCGAGGAAGAAGATGAAGAAGAAGAAGAAGAGAGAAGAGGGAAAGG
CAGAGAAGATCGTGTGGTTGAGATTAGAGCCGCCTCANATCGACGGTTTCTGTTCGTTGT
TGACTTCGTCAACGTTCTTCCTCTTCCTAACGTCCTTTACGGCAATGAGTATGATGGTCA
ATATGGAGAANAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCC
GCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACNAATTACGATCCGT

Last Updated on 06.12.2018 16:11