Sequences from confirmation amplicon


Confirmation sequences for line 746D08 and hit At5g27420 are shown.
Line ID 746D08
Locus At5g27420 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:9684536
Primers used for PCR HP45 - 8474, show primer details
   
Sequence Name 80-K033554-022-746-D08C-8409
GenBank Accession LN513897 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>80-K033554-022-746-D08C-8409
GCCATTTACACAGACGCAGCGTTTCATCGTCTTCAACTCATTCAAACAAATCGCACACTC
CAACGCTCCTTTACCAATCTTCTGTGTCTTCACTTCTGAGTAAACAAAAGTCGGAAACGT
CTCGATCGTCTCCGCGTCTAACCCACGCGCAACCGTTGCGTTCGTCACTCTCCTCCTAGC
TCCTCCTGCAGGAGTAACGCTACCGTCTACTGCGCCAGTACAGTGACGTATATAGACGGT
GAAGAAGCCCATGAAGAAGAGAGCTGCGATGACAACTACAACGACAACAGCCATGGCTGG
ACTTAGACTGCCGCTGTAAGCATACGGGTCATGTCTCTGGTCCGGGGTTCCGGGTTGACC
CGCCGACACGGATAATAGTAGAAACAAGACAAGAACTGGTAAAGAGATGTGTTTTATGGG
ATCCATTATTAGTTCTGGAGTCCCAAAAAGTTAGTTTTTTTTTTTGGTTTAATATTGGGA
GGAATAAGGATCTGAAGTTTATAGGGAGGTTTTGAAAAGTTTGAAAAAG
   
Sequence Name 80-K033554-022-746-D08C-HP45
GenBank Accession LN513898 [GenBank]
Sequencing primer gene specific primer, HP45: 5'-CTCCACGACTTTTTCAAACTTTTC-3'
Sequence (A. th genome BLAST matches underlined)
>80-K033554-022-746-D08C-HP45
ATCCTTATTCCTCACATATTAAACCAAAAAAAAAAACTAACTTTTTGGGACTCCAAAACT
AATAATGGATCCCATAAAACACATCTCTTTACCAGTTCTTGTCTTGTTTCTACTATTATC
CGTGTCGGCGGGTCAACCCGGAACCCCGGACCAAAGACATGACCCGTATGCTTACAGCGG
CAGTCTAAGTCCAGCCATGGCTGTTGTCGTTGTATTTGTCATCGCAGCTCTCTTCTTCAT
GGGCTTCTTCACCGTCTATATACGTCACTGTACTGGCGCAGTAAACGGTAGCGTTACTCC
TGCAGGAGGAGCTAGGAGGAAAGTGACAAACGCAACGGTTGCGCGTGGGTTAAACGCGAA
AACAATCGAAACGTTTCCAACTTTTGTTTACTCAAAAGTGAAAACACAAAAAATTGGTAA
AGGAGCGTTGGAGTGTGCGATTTGTTTGAATGATTTTGAAAACAATGAAACGCTGCGTCT
GTTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAA
TATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAAATGTCCG
CAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTAT
TTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCT
ACATTCA

Last Updated on 06.12.2018 16:11