Sequences from confirmation amplicon


Confirmation sequences for line 752F08 and hit At3g56400 are shown.
Line ID 752F08
Locus At3g56400 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:20909517
Primers used for PCR IS71 - 8474, show primer details
   
Sequence Name 09-K024916-022-752-F08C-8409
GenBank Accession LN490015 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>09-K024916-022-752-F08C-8409
ATTTCCCGGACATGAAGCCATTTACAATTGAAGCCAAGGGTGCAAGGCAACAAAGCAAGT
CCAGAAGGTTGAGCTCGAACCCAAGATGTTCAGTATCACATACATAGGAAACCACACGTG
TAACACCAACGCAGAAACTCCCAAGAGCAAGACTTGTGACCATCATGATGAGATCTTCAT
GGATTCCGAAGATCACAAGAGTCCTAGTTTATCTACCTCAATGAAGGAAGAAGACAATCC
TCATCGTCATCATGGTTCGTCCACGGAGAATGACTTGTCATTGGTGTGGCCAGAAATGGT
TTTCGAAGAAGATTATCATCATCAGGCCAGTTACGTCAATGGGAAAACGAGTACATCTAT
CGATGTTTTGGGTTCTCAGGATCTCATGGTGTTTGGAGGTGGCGGCGATTTCGAGTTTAG
CGAAAATGAGCACTTCTCTATCTTCAGTTCATGTTCGAATCTATCTTGAGTTTACCACTA
CTATAGGACTAAGACCATGAGTTTTAATCATTAATTAGGCCATGTAGAGTGGAAAACATA
TAATACATATTTTGCCCTT
   
Sequence Name 10-K024916-022-752-F08C-IS71
GenBank Accession LN490488 [GenBank]
Sequencing primer gene specific primer, IS71: 5'-ACACTCATTAGAGAAAAGGGCAAA-3'
Sequence (A. th genome BLAST matches underlined)
>10-K024916-022-752-F08C-IS71
TATTATATGTTTTCCACTCTACATGGCCTAATTAATGATTAAAACTCATGGTCTTAGTCC
TATAGTAGTGGTAAACTCAAGATAGATTCGAACATGAACTGAAGATAGAGAAGTGCTCAT
TTTCGCTAAACTCGAAATCGCCGCCACCTCCAAACACCATGAGATCCTGAGAACCCAAAA
CATCGATAGATGTACTCGTTTTCCCATTGACGTAACTGGCCTGATGATGATAATCTTCTT
CGAAAACCATTTCTGGCCACACCAATGACAAGTCATTCTCCGTGGACGAACCATGATGAC
GATGAGGATTGTCTTCTTCCTTCATTGAGGTAGATAAACTAGGACTCTTGTGATCTTCGG
AATCCATGAAGATCTCATCATGATGGTCACAAGTCTTGCTCTTGGGAGTTTCTGCGTTGG
TGTTACACGTGTGGTTTCCTATGTATGTGATACTGAACATCTTGGGTTCGAGCTCAACCT
TCTGGACTTGCTTTGTTGCCTTGCACCCTTGGCTTCAATTGTAAATGGCTTCATGTCCGG
GAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAAT
TACCAATTTTTTTTCAATTCAAAAATGTAGATGT

Last Updated on 06.12.2018 16:11