Sequences from confirmation amplicon


Confirmation sequences for line 784C05 and hit At1g75850 are shown.
Line ID 784C05
Locus At1g75850 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:28482048
Primers used for PCR JV65 - 8474, show primer details
   
Sequence Name 44-K101326-0022-784-C05C-8409
GenBank Accession LN505121 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>44-K101326-0022-784-C05C-8409
GAGCCATTTACATTGAATATATCCTGATCACCAATTAAAAGTTTTTGAAAGAGGTCCCTG
ATCTCTTACAGTTTGACTGGAATTACTAAACTCTGAGCAGGGAATCCTCAACAGAGCACT
TTTCTATTGAATTCACTATCAGCACTTTTCTCACTCAAGAGTTATTTGACATTTTTCCTT
CCTCTCTGACCTTAAGAAATAATTTCTCAGCCAACTGTTGACACGAAGATAGTGTTAACC
CAACTAATGGACCGGTTATCAAACTATGCTGCCTCAAGTCCAGATGTAAGTTCCCATTGA
GCTATCATCGTTCCTTTTTATTTTTGTTTGTTAGCTAGATGTCTTCTTATTCTTAACTTC
TGAGCAGGTGTTACACGAATTTTTGCAAGTGGAAGCTTTTGCTAAATTGAGCAATGCAAT
TGGAAAGGTGGGTTCCAATAAAGGAAAATCTTTTATGAATGCAACTTTCTTTTGGCTGTT
TGATACTTGAATCATAATGGCCTTTAGAATGGTCCTATGTAGGTCCCCTATACCCTGAGA
AGTACA
   
Sequence Name 44-K101332-0022-784-C05C-JV65
GenBank Accession LN505122 [GenBank]
Sequencing primer gene specific primer, JV65: 5'-GTACTTCTCAGGGTATAGGGGACC-3'
Sequence (A. th genome BLAST matches underlined)
>44-K101332-0022-784-C05C-JV65
ATTCAGTATCAACAGCCAAAAGAAAGTTGCATTCATAAAAGATCTTTCTTTATTGGAACC
CACCTTTCCAATTGCATTGCTCAATTTAGCAAAAGCTTCCACTTGCAAAAATTCGTGTAA
CACCTGCTCAGAAGTTAAGAATAAGAAGACATCTAGCTAACAAACAAAAATAAAAAGGAA
CGATGATAGCTCAATGGGAACTTACATCTGGACTTGAGGCAGCATAGTTTGATAACCGGT
CCATTAGTTGGGTTAACACTATCTTCGTGTCAACAGTTGGCTGAGAAATTATTTCTTAAG
GTCAGAGAGGAAGGAAAAATGTCAAATAACTCTTGAGTGAGAAAAGTGCTGATAGTGAAT
TCAATAGAAAAGTGCTCTGTTGAGGATTCCCTGCTCAGAGTTTAGTAATTCCAGTCAAAC
TGTAAGAGATCAGGGACCTCTNTCAAAAACTTTTAATTGGTGATCAGGATATATTCAATT
GTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATAT
GGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCCAAAATGT

Last Updated on 06.12.2018 16:11