Sequences from confirmation amplicon


Confirmation sequences for line 787G04 and hit At4g32950 are shown.
Line ID 787G04
Locus At4g32950 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:15905825
Primers used for PCR CN08 - 8474, show primer details
   
Sequence Name 76-K030839-022-787-G04C-8409
GenBank Accession LN513323 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>76-K030839-022-787-G04C-8409
GCCATTTACATTGAATATATCCTGCCTCCGGCTAAAGAAGAGACAGAGCCCAAGTTTTGA
GGAACAACATGGTGGTCAGAGTATAAAACTGCATTTTCTTGTCCATAATCAGTTATCTCA
TAAATCTGACTTTTATCTGTTGATCCTCCTGAGGATAAACAAAAACAAAATCCCATAATT
TTCTTTTCTTCTTTTGTGTTTTGCCTTTTTTTTTTTTTTTTTTGGGTTGGTTTTTTTTTT
TTTTTGAAAGGGGGAAAAAAACCAAAAAAAAAAAATTTTTAAACCCCATTTTTTTTTTTG
GAAAAACCCATTTTTAACCCCTTTTGGAATTTTTTTTAAGAAAAATTTAAAAACATTTTT
TTTTTTTCTCCCCAAAAATTTGTTTTTTGGGGTTTTAAAAAAAAAGTTTTTTTATTTCGG
GGGGGGGCAAAAAAATTTTTTTTTTTCAAAAACTTTTTTTAAAAAAATGAACCCTTTTTA
AAAATAAAAAACCTTGTTTAAAAAGGAGCCTTTCCCCCAATTAATAAAAAAAAA
   
Sequence Name 77-K030839-022-787-G04C-CN08
GenBank Accession LN513480 [GenBank]
Sequencing primer gene specific primer, CN08: 5'-TTTCTAATATAATTGGCGGAAACG-3'
Sequence (A. th genome BLAST matches underlined)
>77-K030839-022-787-G04C-CN08
CTATTATCAAAGGATTCAATTTTTTAAAAAATGTTATGAAAAACAAAAATATTGATCGAC
CGCCTCGGAATTAAAAATCATTCTTTTTAAATGCCTAAAGATACAAGTCATCGAGATGAA
AATAAAAGTATGTATTAATATATTCCTAAATAAGATTCACAAAGGGCTATATAACTGGTA
TATGCAATAAGTAAAGTCGTGTATCAAACTTTTTCATTTGTTGTATCATCTCCCTCTTAC
ATATACAGAAAACAGCAAACCAAAAAAAAAAAAAAAAAGGGGAAAACCAAAAAAAAAAAA
AAAAAATTTTGGGTTTTTTTTTTTTTTTTCCCCCCGGGGGAACAAAAAAAAAAAATCAAA
TTTTTGAAAAAACCGAATTGGGAAAAAAAAATGGCTTTTTTACCCCCGACCCCCCGGTTT
TTCCCCAAAAATTGGGCTTTTTTCTTTTTTTGGCCGGGGGGGGGAAAATTTCAATTTGAA
AGGGCTTCCTGCCCGGGAAATTCCCCGGGGTCCCCAATGGGTTTGGGGGGCAAATGGGAA
AAAAAAAAAAAATTTTTCCCCATTTTTTTTCAAATAAAAAAAGGAAATTCCCCCCCCTTT
TTTTAAAAAAGAAAGTTCTTTTTGAAAAAACCCAAAATTCCCATCCCCCCTTTTTTAGGG
GAAAAACAAAAAAAAAATTTTTTTAATTTGAAAATTTTTTTTTCCCC
Primers used for PCR 07ah - 8474, show primer details
   
Sequence Name 33-K118413-0022-787-G04C-8409
GenBank Accession LN501185 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>33-K118413-0022-787-G04C-8409
TTACATTGAATATATCCTGGTACTTTATACTTTTGAAAATATATATATGTTTGTCTTCAA
AACAATTAATTTGTTTTTAACGGAATGAAATGATAAATTTGTAGGGATATGGAACAGAAG
AAGGAGCGTTATGTGGAGTGTTTGATGGGCATGGACCGAGAGGTGCGTTTGTGAGCAAGA
ACGTAAGGAACCAATTGCCATCTATACTCTTAGGCCACATGAATAATCATTCAGTGACTC
GAGACTGGAAACTCATATGCGAAACATCGTGTTTGGAGATGGACAAAAGGATTCTTAAAG
TTAAAAAGATTCATGATTGCTCTGCTTCGGGAACTACT
   
Sequence Name 81-K118414-0022-787-G04C-07ah
GenBank Accession LN514117 [GenBank]
Sequencing primer gene specific primer, 07ah: 5'-AGTAGTTCCAGAAGCAGAGCAATC-3'
Sequence (A. th genome BLAST matches underlined)
>81-K118414-0022-787-G04C-07ah
CTCCAACACGATGTTTCGCATATGAGTTTCCAGTCTCGAGTCACTGAATGATTATTCATG
TGGCCTAAGAGTATAGATGGCAATTGGTTCCTTACGTTCTTGCTCACAAACGCACCTCTC
GGTCCATGCCCATCAAACACTCCACATAACGCTCCTTCTTCTGTTCCATATCCCTACAAA
TTTATCATTTCATTCCGTTAAAAACAAATTAATTGTTTTGAAGACAAACATATATATATT
TTCAAAAGTATAAAGTACCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATC
TACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAA
TTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGGTTATT

Last Updated on 06.12.2018 16:11