Sequences from confirmation amplicon


Confirmation sequences for line 799C05 and hit At5g21030 are shown.
Line ID 799C05
Locus At5g21030 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:7144286
Primers used for PCR IF17 - 8474, show primer details
   
Sequence Name 09-K032599-022-799-C05C-8409
GenBank Accession LN490067 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>09-K032599-022-799-C05C-8409
CATTGAAATATCCTGGAGGCCGAGAAATGGATACGACTCTACCGCCTCCTCAACACATGG
AACGTGAACCTTTGAAGAGCAAGAGTAGTCTTCTTCCAATGACTCGCCGTGGCAACGGTT
CCAAAGGACAGAAGATTCTTCTGCTCACTAACCACTTCAGAGTCAACTTCAGAAAACCAA
ACAGTCATAATTTCTTCCATTACAGCGTGCGCTTTTTGTTTCCCTTCCTGTTCCTGTTTC
CATGACTTGATTTGGAAAACATACTTTATAGTGTGCTTTGTCTCTTTGGATACAGGTTAC
TATCACATATGAAGATGGTAGTCCACTTTTAGCCAAAGGTTTTGGCAGAAAGATTCTTGA
AAAAGTTCAACAGACTTGTCAAGCTGATTTGGGTTGCAAACATTTTGCTTATGATGGCGA
CAAGAATCTTTATACTGTTGGTCCTCTTCCTAGATCCAGTCTAGACTTCTCTGTTGTTCT
TGAAACCGCGCCTTCTAGGAGAAACGCA
   
Sequence Name 09-K032599-022-799-C05C-IF17
GenBank Accession LN490068 [GenBank]
Sequencing primer gene specific primer, IF17: 5'-GAAGCTTTAGTCTTTTGTCTGCGT-3'
Sequence (A. th genome BLAST matches underlined)
>09-K032599-022-799-C05C-IF17
GACACAGAGAAGTCTAGACTGGATCTAGGAAGAGGACCAACAGTATAAAGATTCTTGTCG
CCATCATAAGCAAAATGTTTGCAACCCAAATCAGCTTGACAAGTCTGTTGAACTTTTTCA
AGAATCTTTCTGCCAAAACCTTTGGCTAAAAGTGGACTACCATCTTCATATGTGATAGTA
ACCTGTATCCAAAGAGACAAAGCACACTATAAAGTATGTTTTCCAAATCAAGTCATGGAA
ACAGGAACAGGAAGGGAAACAAAAAGCGCACGCTGTAATGGAAGAAATTATGACTGTTTG
GTTTTCTGAAGTTGACTCTGAAGTGGTTAGTGAGCAGAAGAATCTTCTGTCCTTTGGAAC
CGTTGCCACGGCGAGTCATTGGAAGAAGACTACTCTTGCTCTTCAAAGGTTCACGTTCCA
TGTGTTGAGGAGGCGGTAGAGTCGTATCCATTTCTCGGCCTCCAGGATATATTCAATTGT
AAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGG
AGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCG
TTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATA
GGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACA

Last Updated on 06.12.2018 16:11