Sequences from confirmation amplicon


Confirmation sequences for line 811B09 and hit At5g04640 are shown.
Line ID 811B09
Locus At5g04640 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:1333218
Primers used for PCR GA39 - 8474, show primer details
   
Sequence Name 62-K101385-0022-811-B09C-8409
GenBank Accession LN510713 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>62-K101385-0022-811-B09C-8409
CCATTTACATTGAATATACATTATGATGGTCCCCGGACATGAACCTGTGAAGAAGAAGGG
TGTTTTACACGGAACTCATCAAAAGCAAACCTTTAATCCTGAATCATGTTCTGTGAATTT
CGATGGGTTTAACAAGAACACTGAAGAATTTGATCTTGATGAAATATTTGATTATGTGTC
AACAGCTGAAGCTCTATCGATGAACTTGGACATGGACGATGTCTCTGTGGTGACCACGAA
TCAAAACCCCGTCTCTGCTTCTGAAACTGTTGAAGATAGAGAATTGGTTGTTCACAAAAA
TATGGATGAGGACAATATCCACGTGTCTGATATGGACGACNAGGATACGATGCTNATGAT
TTCTGACAAGAACAATGTTTTTACTGAAAACTTGGATGAATTCGATCAAGAGCTAGATCT
TGATC
   
Sequence Name 62-K101391-0022-811-B09C-GA39
GenBank Accession LN510714 [GenBank]
Sequencing primer gene specific primer, GA39: 5'-GGGAGTTTCAAATATCAGCAATGT-3'
Sequence (A. th genome BLAST matches underlined)
>62-K101391-0022-811-B09C-GA39
CCTCCGGTAATCTTTTTGAATCTTAATCCTCCATCTTCAACAGCTTCAGGATTTGAGCAC
AGATTTTGCTTTGTAGTCACCATCGAGGCATAATCCTCCATCTCACAACTCTTCAAAAGG
CTTTCATAGTTTGTCTCAAAATCAAGTAGCTGATCAAGATCTAGCTCTTGATCGAATTCA
TCCAAGTTTTCAGGTAAAACATTGTTCTTGTCAGAAATCATTAGCATCGTATCCTTGTCG
TCCATATCAGACACGTGGATATTGTCCTCATCCATATTTTTGTGAACAACCAATTCTCTA
TCTTCAACAGTTTCAGAAGCAGAGACGGGGTTTTGATTCGTGGTCACCACAGAGACATCG
TCCATGTCCAAGTTCATCGATNGAGCTTCAGCTGTTGACACATAATCAAATATNTCATCA
AGATCAAATTCTTCAGTGTTCTTGTTAAACCCATCGAAATTCACAGA

Last Updated on 06.12.2018 16:11